Evidence map›Paper›PMID 39169219›Full record

ArticleNature cell biology2024

RNA sequestration in P-bodies sustains myeloid leukaemia.

Srikanth Kodali, Ludovica Proietti, Gemma Valcarcel, Anna V López-Rubio, Patrizia Pessina, Thomas Eder, Junchao Shi, Annie Jen, Núria Lupión-Garcia, Anne C Starner and 22 more

Abstract read
In one paragraph

Article in Nature cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  20. Biomolecular condensates in immune cell fate.Nature reviews. Immunology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

Srikanth Kodali *Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0001-9330-9880
Ludovica Proietti *Institute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-3077-0079
Gemma ValcarcelJosep Carreras Leukaemia Research Institute, Badalona, Spain.ORCID http://orcid.org/0000-0003-0494-9128
Anna V López-RubioJosep Carreras Leukaemia Research Institute, Badalona, Spain.ORCID http://orcid.org/0000-0001-8664-6205
Patrizia PessinaStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0002-4227-411X
Thomas EderInstitute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-0932-2052
Junchao ShiDivision of Biomedical Sciences, School of Medicine, University of California, Riverside, Riverside, CA, USA.ORCID http://orcid.org/0000-0002-1548-5069
Annie JenDepartment of Biomolecular Chemistry, University of Wisconsin, Madison, WI, USA.ORCID http://orcid.org/0000-0001-5569-8387
Núria Lupión-GarciaStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0001-6493-9293
Anne C StarnerVerna & Marrs McLean Department of Biochemistry & Molecular Biology and Therapeutic Innovation Center, Baylor College of Medicine, Houston, TX, USA.
Mason D BartelsVerna & Marrs McLean Department of Biochemistry & Molecular Biology and Therapeutic Innovation Center, Baylor College of Medicine, Houston, TX, USA.
Yingzhi CuiStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0009-0005-8475-3361
Caroline M SandsStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0002-3232-7716
Ainoa Planas-RiverolaJosep Carreras Leukaemia Research Institute, Badalona, Spain.
Alba MartínezJosep Carreras Leukaemia Research Institute, Badalona, Spain.ORCID http://orcid.org/0000-0001-7514-260X
Talia Velasco-HernandezJosep Carreras Leukaemia Research Institute, Badalona, Spain.ORCID http://orcid.org/0000-0003-2183-7443
Laureano Tomás-DazaJosep Carreras Leukaemia Research Institute, Badalona, Spain.ORCID http://orcid.org/0000-0002-6127-1694
Bernhard AlberInstitute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-7601-4826
Gabriele ManhartInstitute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria.
Isabella Maria MayerInstitute of Pharmacology and Toxicology, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-9164-9547
Karoline KollmannInstitute of Pharmacology and Toxicology, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-7937-4245
Alessandro FaticaDepartment of Biology and Biotechnology 'Charles Darwin', Sapienza University of Rome, Rome, Italy.ORCID http://orcid.org/0000-0002-0743-7905
Pablo MenendezJosep Carreras Leukaemia Research Institute, Badalona, Spain.
Evgenia ShishkovaDepartment of Biomolecular Chemistry, University of Wisconsin, Madison, WI, USA.
Rachel E RauStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.
Biola M JavierreJosep Carreras Leukaemia Research Institute, Badalona, Spain.ORCID http://orcid.org/0000-0002-8682-6748
Joshua CoonDepartment of Biomolecular Chemistry, University of Wisconsin, Madison, WI, USA.ORCID http://orcid.org/0000-0002-0004-8253
Qi ChenMolecular Medicine Program, Division of Urology, Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT, USA.ORCID http://orcid.org/0000-0001-6353-9589
Eric L Van NostrandVerna & Marrs McLean Department of Biochemistry & Molecular Biology and Therapeutic Innovation Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0002-5188-0082
Jose L SardinaJosep Carreras Leukaemia Research Institute, Badalona, Spain. jsardina@carrerasresearch.org.ORCID http://orcid.org/0000-0002-8493-3937
Florian GrebienInstitute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria. Florian.Grebien@vetmeduni.ac.at.ORCID http://orcid.org/0000-0003-4289-2281
Bruno Di StefanoStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA. bruno.distefano@bcm.edu.ORCID http://orcid.org/0000-0003-2532-3087

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Suzanne AW Fuqua · 2007 to 2026
$73.9M
TR&D 2 Metabolic Labels for Ultraplexed Protein Quantification p. 453P41GM108538 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COON, JOSHUA J · 2016 to 2025
$13.1M
Hematology Training ProgramT32DK060445 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2002 to 2023
$8.3M
Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
DEFINING THE ROLE OF RNA SEQUESTRATION IN MAMMALIAN CELL FATER35GM147126 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Bruno Di Stefano · 2022 to 2026
$2.0M
Multiplexed detection and imaging of protein phosphorylation based on soluble nanopolymersR44CA200040 · NCI · TYMORA ANALYTICAL OPERATIONS, LLC · PI ILIUK, ANTON · 2015 to 2016
$897k
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
Targeting the RNA helicase DDX6 in acute myeloid leukemiaF32CA288043 · NCI · BAYLOR COLLEGE OF MEDICINE · PI KODALI, SRIKANTH · 2024 to 2024
$77k
Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P35298Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P-35628Austrian Science Fund FWF P 35298Cancer Prevention and Research Institute of Texas (Cancer Prevention Research Institute of Texas) RR200040Cancer Prevention and Research Institute of Texas (Cancer Prevention Research Institute of Texas) RR200079Ministry of Economy and Competitiveness | Instituto de Salud Carlos III (Institute of Health Carlos III) CP19/00176Ministry of Economy and Competitiveness | Instituto de Salud Carlos III (Institute of Health Carlos III) CP22/00127NCI NIH HHS F32 CA288043NCI NIH HHS P30 CA125123NCRR NIH HHS S10 RR024574NHLBI NIH HHS T32 HL092332NIDDK NIH HHS T32 DK060445NIGMS NIH HHS P41 GM108538NIGMS NIH HHS R35 GM147126U.S. Department of Health & Human Services | NIH | Office of Extramural Research, National Institutes of Health (OER) 1F32CA288043-01U.S. Department of Health & Human Services | NIH | Office of Extramural Research, National Institutes of Health (OER) 1R35GM147126-01U.S. Department of Health & Human Services | NIH | Office of Extramural Research, National Institutes of Health (OER) 5T32DK060445-19Worldwide Cancer Research 20-0269
6 · The paper itself

Abstract

Post-transcriptional mechanisms are fundamental safeguards of progenitor cell identity and are often dysregulated in cancer. Here, we identified regulators of P-bodies as crucial vulnerabilities in acute myeloid leukaemia (AML) through genome-wide CRISPR screens in normal and malignant haematopoietic progenitors. We found that leukaemia cells harbour aberrantly elevated numbers of P-bodies and show that P-body assembly is crucial for initiation and maintenance of AML. Notably, P-body loss had little effect upon homoeostatic haematopoiesis but impacted regenerative haematopoiesis. Molecular characterization of P-bodies purified from human AML cells unveiled their critical role in sequestering messenger RNAs encoding potent tumour suppressors from the translational machinery. P-body dissolution promoted translation of these mRNAs, which in turn rewired gene expression and chromatin architecture in leukaemia cells. Collectively, our findings highlight the contrasting and unique roles of RNA sequestration in P-bodies during tissue homoeostasis and oncogenesis. These insights open potential avenues for understanding myeloid leukaemia and future therapeutic interventions.

Indexed as

Leukemia, Myeloid, AcuteRNA, MessengerAnimalsCell Line, TumorGene Expression Regulation, LeukemicHematopoiesisHematopoietic Stem CellsHumansMiceMice, Inbred C57BLRNA, Messenger

Identifiers

PMID39169219
PMCPMC12042958

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.