Evidence map›Paper›PMID 39169041›Full record

ArticleNature communications2024

Single-nucleosome imaging unveils that condensins and nucleosome-nucleosome interactions differentially constrain chromatin to organize mitotic chromosomes.

Kayo Hibino, Yuji Sakai, Sachiko Tamura, Masatoshi Takagi, Katsuhiko Minami, Toyoaki Natsume, Masa A Shimazoe, Masato T Kanemaki, Naoko Imamoto, Kazuhiro Maeshima

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Histone Density and Dynamics Shape Mitotic Chromatid Architecture in Xenopus Egg Extracts.Genes to cells : devoted to molecular & cellular mechanisms · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Mitotic genome folding.The Journal of cell biology · 2025
    Review
  14. The shifting paradigm of chromatin structure: from the 30-nm chromatin fiber to liquid-like organization.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2025
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kayo HibinoGenome Dynamics Laboratory, National Institute of Genetics, Mishima, Shizuoka, Japan.ORCID 0000-0002-4047-883X
Yuji SakaiGraduate School of Nanobioscience, Yokohama City University, Yokohama, Kanagawa, Japan.ORCID 0000-0002-2184-4304
Sachiko TamuraGenome Dynamics Laboratory, National Institute of Genetics, Mishima, Shizuoka, Japan.
Masatoshi TakagiCellular Dynamics Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama, Japan.
Katsuhiko MinamiGenome Dynamics Laboratory, National Institute of Genetics, Mishima, Shizuoka, Japan.ORCID 0000-0002-1750-5473
Toyoaki NatsumeGraduate Institute for Advanced Studies, SOKENDAI, Mishima, Shizuoka, Japan.ORCID 0000-0002-3544-4491
Masa A ShimazoeGenome Dynamics Laboratory, National Institute of Genetics, Mishima, Shizuoka, Japan.ORCID 0000-0002-2018-0497
Masato T KanemakiGraduate Institute for Advanced Studies, SOKENDAI, Mishima, Shizuoka, Japan.ORCID 0000-0002-7657-1649
Naoko ImamotoCellular Dynamics Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama, Japan.ORCID 0000-0002-2886-3022
Kazuhiro MaeshimaGenome Dynamics Laboratory, National Institute of Genetics, Mishima, Shizuoka, Japan. kmaeshim@nig.ac.jp.ORCID 0000-0003-3909-0341

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) JP20H05936MEXT | Japan Society for the Promotion of Science (JSPS) JP21H02453MEXT | Japan Society for the Promotion of Science (JSPS) JP23K17398MEXT | Japan Society for the Promotion of Science (JSPS) JP24H00061
6 · The paper itself

Abstract

For accurate mitotic cell division, replicated chromatin must be assembled into chromosomes and faithfully segregated into daughter cells. While protein factors like condensin play key roles in this process, it is unclear how chromosome assembly proceeds as molecular events of nucleosomes in living cells and how condensins act on nucleosomes to organize chromosomes. To approach these questions, we investigate nucleosome behavior during mitosis of living human cells using single-nucleosome tracking, combined with rapid-protein depletion technology and computational modeling. Our results show that local nucleosome motion becomes increasingly constrained during mitotic chromosome assembly, which is functionally distinct from condensed apoptotic chromatin. Condensins act as molecular crosslinkers, locally constraining nucleosomes to organize chromosomes. Additionally, nucleosome-nucleosome interactions via histone tails constrain and compact whole chromosomes. Our findings elucidate the physical nature of the chromosome assembly process during mitosis.

Indexed as

Adenosine TriphosphatasesChromatinDNA-Binding ProteinsMitosisMultiprotein ComplexesNucleosomesChromosomesChromosomes, HumanHeLa CellsHistonesHumansAdenosine TriphosphatasesChromatincondensin complexesDNA-Binding ProteinsHistonesMultiprotein ComplexesNucleosomes

Identifiers

PMID39169041
PMCPMC11339268

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.