Evidence map›Paper›PMID 39168982›Full record

ArticleNature communications2024

Mechanism and regulation of cargo entry into the Commander endosomal recycling pathway.

Rebeka Butkovič, Alexander P Walker, Michael D Healy, Kerrie E McNally, Meihan Liu, Tineke Veenendaal, Kohji Kato, Nalan Liv, Judith Klumperman, Brett M Collins and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Identification of a VPS29 isoform with restricted association to Retriever and Retromer accessory proteins through autoinhibition.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Review
  11. The winding road to platelet α-granules.Frontiers in cell and developmental biology · 2025
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Rebeka ButkovičSchool of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol, UK. rebeka.butkovic@bristol.ac.uk.ORCID 0000-0002-6911-1265
Alexander P Walker *School of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol, UK.
Michael D Healy *Centre for Cell Biology of Chronic Disease, Institute for Molecular Biosciences, The University of Queensland, SLCA, Australia.ORCID 0000-0003-2924-9179
Kerrie E McNallySchool of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol, UK.ORCID 0000-0003-2376-3003
Meihan LiuCentre for Cell Biology of Chronic Disease, Institute for Molecular Biosciences, The University of Queensland, SLCA, Australia.ORCID 0009-0006-7463-4497
Tineke VeenendaalCenter for Molecular Medicine, University Medical Center Utrecht, Institute of Biomembranes, Utrecht University, Utrecht, The Netherlands.
Kohji KatoSchool of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol, UK.
Nalan LivCenter for Molecular Medicine, University Medical Center Utrecht, Institute of Biomembranes, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0003-2654-9117
Judith KlumpermanCenter for Molecular Medicine, University Medical Center Utrecht, Institute of Biomembranes, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0003-4835-6228
Brett M CollinsCentre for Cell Biology of Chronic Disease, Institute for Molecular Biosciences, The University of Queensland, SLCA, Australia. b.collins@imb.uq.edu.au.ORCID 0000-0002-6070-3774
Peter J CullenSchool of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol, UK. pete.cullen@bristol.ac.uk.ORCID 0000-0002-9070-8349

Funding

Department of Health | National Health and Medical Research Council (NHMRC) APP1136021Department of Health | National Health and Medical Research Council (NHMRC) APP1156493EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 953489Medical Research Council MR/L007363/1Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) 184.034.014RCUK | Medical Research Council (MRC) MR/P018807/1Royal Society RSRP/R1/211004Wellcome TrustWellcome Trust (Wellcome) 220260/Z/20/Z
6 · The paper itself

Abstract

Commander is a multiprotein complex that orchestrates endosomal recycling of integral cargo proteins and is essential for normal development. While the structure of this complex has recently been described, how cargo proteins are selected for Commander-mediated recycling remains unclear. Here we identify the mechanism through which the unstructured carboxy-terminal tail of the cargo adaptor sorting nexin-17 (SNX17) directly binds to the Retriever sub-complex of Commander. SNX17 adopts an autoinhibited conformation where its carboxy-terminal tail occupies the cargo binding groove. Competitive cargo binding overcomes this autoinhibition, promoting SNX17 endosomal residency and the release of the tail for Retriever association. Furthermore, our study establishes the central importance of SNX17-Retriever association in the handover of integrin and lipoprotein receptor cargoes into pre-existing endosomal retrieval sub-domains. In describing the principal mechanism of cargo entry into the Commander recycling pathway we provide key insight into the function and regulation of this evolutionary conserved sorting pathway.

Indexed as

EndosomesProtein TransportSorting NexinsHeLa CellsHumansIntegrinsProtein BindingIntegrinsSNX17 protein, humanSorting Nexins

Identifiers

PMID39168982
PMCPMC11339278

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.