Evidence map›Paper›PMID 39167981›Full record

ArticleDrug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy2024

Ultrastructural, metabolic and genetic characteristics of determinants facilitating the acquisition of macrolide resistance by Streptococcus pneumoniae.

Xueqing Wu, Babek Alibayov, Xi Xiang, Santiago M Lattar, Fuminori Sakai, Austin A Medders, Brenda S Antezana, Lance E Keller, Ana G J Vidal, Yih-Ling Tzeng and 4 more

Abstract read
In one paragraph

Article in Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Lactate Oxidase (LctO) Acts as a Metabolic Checkpoint RestrainingbioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Xueqing WuDepartment of Infectious Diseases, Regional Medical Center for National Institute of Respiratory Diseases, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou 310052, China; Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou 310052, China.
Babek AlibayovCenter for Immunology and Microbial Research, University of Mississippi Medical Center, Jackson, MS 39216, United States.
Xi XiangDepartment of Clinical Laboratory, Affiliated Jinhua Hospital, Zhejiang University School of Medicine, Jinhua 321000, China.
Santiago M LattarHubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA 30322, United States.
Fuminori SakaiHubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA 30322, United States.
Austin A MeddersDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS 39216, United States.
Brenda S AntezanaDepartment of Medicine, School of Medicine, Emory University, Atlanta, GA 30322, United States; Graduate Program in Microbiology and Molecular Genetics, Emory University, Atlanta, GA 30322, United States.
Lance E KellerDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS 39216, United States; Center for Immunology and Microbial Research, University of Mississippi Medical Center, Jackson, MS 39216, United States.
Ana G J VidalDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS 39216, United States.
Yih-Ling TzengDepartment of Medicine, School of Medicine, Emory University, Atlanta, GA 30322, United States; Graduate Program in Microbiology and Molecular Genetics, Emory University, Atlanta, GA 30322, United States.
D Ashley RobinsonDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS 39216, United States; Center for Immunology and Microbial Research, University of Mississippi Medical Center, Jackson, MS 39216, United States.
David S StephensDepartment of Medicine, School of Medicine, Emory University, Atlanta, GA 30322, United States; Graduate Program in Microbiology and Molecular Genetics, Emory University, Atlanta, GA 30322, United States.
Yunsong YuDepartment of Infectious Diseases, Regional Medical Center for National Institute of Respiratory Diseases, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou 310052, China; Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou 310052, China. Electronic address: yvys119@zju.edu.cn.
Jorge E VidalDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS 39216, United States; Center for Immunology and Microbial Research, University of Mississippi Medical Center, Jackson, MS 39216, United States. Electronic address: jvidal@umc.edu.

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI MICHAEL R GARRETT · 2012 to 2026
$60.2M
Role of obesity in preeclamptic pregnancy.P20GM121334 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI Babbette LaMarca, Jane F Reckelhoff · 2017 to 2026
$26.4M
Sex differences in operant cocaine memoriesP20GM144041 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI Brigitte Martin · 2023 to 2026
$12.1M
Pilot Projects ProgramP30GM149404 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI DAVID E STEC · 2023 to 2026
$6.3M
The oxidation of heme-carrying proteins in the pathophysiology of pneumococcal diseaseR01AI175461 · NIAID · UNIVERSITY OF MISSISSIPPI MED CTR · PI Jorge Eugenio Vidal · 2024 to 2026
$1.2M
Population Dynamics of S. pneumoniae vaccine serotypes on human pharyngeal cellsR21AI112768 · NIAID · EMORY UNIVERSITY · PI VIDAL, JORGE EUGENIO · 2015 to 2016
$429k
DISSEMINATION OF MACROLIDE RESISTANCE ELEMENTS IN STREPTOCOCCUS PNEUMONIAER21AI144571 · NIAID · UNIVERSITY OF MISSISSIPPI MED CTR · PI STEPHENS, DAVID S, TZENG, YIH-LING · 2019 to 2020
$397k
NIAID NIH HHS R01 AI175461NIAID NIH HHS R21 AI112768NIAID NIH HHS R21 AI144571NIGMS NIH HHS P20 GM103476NIGMS NIH HHS P20 GM121334NIGMS NIH HHS P20 GM144041NIGMS NIH HHS P30 GM149404
6 · The paper itself

Abstract

aimsTo investigate the molecular events associated with acquiring macrolide resistance genes [mefE/mel (Mega) or ermB] in Streptococcus pneumoniae (Spn) during nasopharyngeal colonization. METHODS AND

resultsGenomic analysis of 128 macrolide-resistant Spn isolates revealed recombination events in genes of the conjugation apparatus, or the competence system, in strains carrying Tn916-related elements. Studies using confocal and electron microscopy demonstrated that during the transfer of Tn916-related elements in nasopharyngeal cell biofilms, pneumococcal strains formed clusters facilitating their acquisition of resistance determinants at a high recombination frequency (rF). Remarkably, these aggregates comprise both encapsulated and nonencapsulated pneumococci that span extracellular and intracellular compartments. rF assessments showed similar rates regardless Mega was associated with large integrative and conjugative elements (ICEs) (>23 kb) or not (∼5.4 kb). The rF for Mega Class IV(c) insertion region (∼53 kb) was three orders of magnitude higher than the transformation of the capsule locus. Metabolomics studies of the microenvironment created by colonization of human nasopharyngeal cells revealed a link between the acquisition of ICEs and the pathways involving nicotinic acid and sucrose.

conclusionsPneumococcal clusters, both extracellular and intracellular, facilitate macrolide resistance acquisition, and ICEs were acquired at a higher frequency than the capsule locus. Metabolic changes could serve as intervention targets.

Indexed as

Anti-Bacterial AgentsDrug Resistance, BacterialMacrolidesNasopharynxPneumococcal InfectionsStreptococcus pneumoniaeBacterial ProteinsBiofilmsConjugation, GeneticDNA Transposable ElementsHumansMembrane ProteinsMicrobial Sensitivity TestsRecombination, GeneticAnti-Bacterial AgentsBacterial ProteinsDNA Transposable ElementsMacrolidesMefE protein, Streptococcus pneumoniaeMembrane Proteins

Identifiers

PMID39167981
PMCPMC11560628

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.