Evidence map›Paper›PMID 39167166›Full record

ArticleApplied microbiology and biotechnology2024

Transcriptional and secretome analysis of Rasamsonia emersonii lytic polysaccharide mono-oxygenases.

Yashika Raheja, Varinder Singh, Nitish Kumar, Dhruv Agrawal, Gaurav Sharma, Marcos Di Falco, Adrian Tsang, Bhupinder Singh Chadha

Abstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Genomic Analysis ofMicroorganisms · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yashika RahejaDepartment of Microbiology, Guru Nanak Dev University, Amritsar-143005, Punjab, India.
Varinder SinghDepartment of Microbiology, Guru Nanak Dev University, Amritsar-143005, Punjab, India.
Nitish KumarDepartment of Pharmaceutical Sciences, Guru Nanak Dev University, Amritsar, India.
Dhruv AgrawalDepartment of Microbiology, Guru Nanak Dev University, Amritsar-143005, Punjab, India.
Gaurav SharmaDepartment of Microbiology, Guru Nanak Dev University, Amritsar-143005, Punjab, India.
Marcos Di FalcoCenter for Structural and Functional Genomics, Concordia University, 7141 Sherbrooke Street West, Montreal, Quebec, H4B 1R6, Canada.
Adrian TsangCenter for Structural and Functional Genomics, Concordia University, 7141 Sherbrooke Street West, Montreal, Quebec, H4B 1R6, Canada.
Bhupinder Singh ChadhaDepartment of Microbiology, Guru Nanak Dev University, Amritsar-143005, Punjab, India. chadhabs@yahoo.com.ORCID http://orcid.org/0000-0002-3086-6871

Funding

Rajiv Gandhi Centre for Biotechnology, Department of Biotechnology, Ministry of Science and Technology, India BT/PR31115/PBD/26/766/2019
6 · The paper itself

Abstract

The current study is the first to describe the temporal and differential transcriptional expression of two lytic polysaccharide monooxygenase (LPMO) genes of Rasamsonia emersonii in response to various carbon sources. The mass spectrometry based secretome analysis of carbohydrate active enzymes (CAZymes) expression in response to different carbon sources showed varying levels of LPMOs (AA9), AA3, AA7, catalase, and superoxide dismutase enzymes pointing toward the redox-interplay between the LPMOs and auxiliary enzymes. Moreover, it was observed that cello-oligosaccharides have a negative impact on the expression of LPMOs, which has not been highlighted in previous reports. The LPMO1 (30 kDa) and LPMO2 (47 kDa), cloned and expressed in Pichia pastoris, were catalytically active with (k

Indexed as

Mixed Function OxygenasesCelluloseCloning, MolecularFungal ProteinsGene Expression Regulation, FungalHydrolysisOligosaccharidesPolysaccharidesCelluloseFungal ProteinsMixed Function OxygenasesOligosaccharidesPolysaccharidesHydrolysisIn silico modelingLPMOsMass spectrometryRasamsonia emersonii

Identifiers

PMID39167166
PMCPMC11339117

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.