Evidence map›Paper›PMID 39165748›Full record

ArticleJournal of animal science and technology2024

Polymorphism analysis of tri- and tetranucleotide repeat microsatellite markers in Hanwoo cattle.

Shil Jin, Jeong Il Won, Hyoun Ju Kim, Byoungho Park, Sung Woo Kim, Ui Hyung Kim, Sung-Sik Kang, Hyun-Jeong Lee, Sung Jin Moon, Myung Sun Park and 3 more

Abstract read
In one paragraph

Article in Journal of animal science and technology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Shil JinHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0003-1120-3631
Jeong Il WonHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0003-3151-7144
Hyoun Ju KimHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0002-7785-6339
Byoungho ParkAnimal Breeding & Genetics Division, National Institute of Animal Science, Cheonan 31000, Korea.ORCID https://orcid.org/0000-0001-6195-4519
Sung Woo KimHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0001-8521-3010
Ui Hyung KimHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0002-2197-5080
Sung-Sik KangHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0002-9453-5377
Hyun-Jeong LeeHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0002-2312-9048
Sung Jin MoonHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0009-0003-0930-5548
Myung Sun ParkHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0002-1260-5694
Yong Teak SimmiDNA Genome Research institute, Kunsan 54156, Korea.ORCID https://orcid.org/0009-0003-4599-0685
Sun Sik JangHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0002-8121-4697
Nam Young KimHanwoo Research Institute, National Institute of Animal Science, Pyeongchang 25340, Korea.ORCID https://orcid.org/0000-0002-2679-4983

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Hanwoo traceability system currently utilizes 11 dinucleotide repeat microsatellite (MS) markers. However, dinucleotide repeat markers are known to have a high incidence of polymerase chain reaction (PCR) artifacts, such as stutter bands, which can complicate the accurate reading of alleles. In this study, we examined the polymorphisms of the 11 dinucleotide repeat MS markers currently employed in traceability systems. Additionally, we explored four trinucleotide repeat MS markers and one tetranucleotide repeat MS marker in a sample of 1,106 Hanwoo cattle. We also assessed the potential utility of the tri- and tetranucleotide repeat MS markers. The polymorphic information content (PIC) of the five tri- and tetranucleotide repeat markers ranged from 0.663 to 0.767 (mean: 0.722), sufficiently polymorphic and slightly higher than the mean (0.716) of the current 11 dinucleotide repeat markers. Using all 16 markers, the mean PIC was 0.718. The estimated probability of identity (PI) was 3.13 × 10

Indexed as

HanwooMicrosatelliteProbability of exclusionProbability of identification

Identifiers

PMID39165748
PMCPMC11331372

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.