Evidence map›Paper›PMID 39164623›Full record

ArticleBMC genomics2024

Ethanol-related transcriptomic changes in mouse testes.

Gwidong Han, Seung Jae Lee, Seung Pyo Hong, Jaeho Song, Chunghee Cho

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Gwidong HanSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Korea.
Seung Jae LeeSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Korea.
Seung Pyo HongSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Korea.
Jaeho SongSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Korea.
Chunghee ChoSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Korea. choch@gist.ac.kr.

Funding

GIST Research Institute (GRI) grant 2022National Research Foundation of Korea 2022R1A2C1003441
6 · The paper itself

Abstract

backgroundAlcohol consumption is widely known to have detrimental effects on various organs and tissues. The effects of ethanol on male reproduction have been studied at the physiological and cellular levels, but no systematic study has examined the effects of ethanol on male reproduction-related gene expression.

resultsWe employed a model of chronic ethanol administration using the Lieber-DeCarli diet. Ethanol-fed mice showed normal testicular and epididymal integrity, and sperm morphology, but decreased sperm count. Total RNA sequencing analysis of testes from ethanol-fed mice showed that a small fraction (∼ 2%) of testicular genes were differentially expressed in ethanol-fed mice and that, of these genes, 28% were cell-type specific in the testis. Various in silico analyses were performed, and gene set enrichment analysis revealed that sperm tail structure-related genes, including forkhead box J1 (Foxj1), were down-regulated in testes of ethanol-fed mice. Consistent with this result, ethanol-fed mice exhibited decreased sperm motility.

conclusionThis study provides the first comprehensive transcriptomic profiling of ethanol-induced changes in the mouse testis, and suggests gene expression profile changes as a potential mechanism underlying ethanol-mediated reproductive dysfunction, such as impaired sperm motility.

Indexed as

EthanolGene Expression ProfilingTestisTranscriptomeAnimalsMaleMiceSpermatozoaSperm CountSperm MotilityEthanolAlcoholEthanolSpermatogenesisSperm motilityTestis

Identifiers

PMID39164623
PMCPMC11337739

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.