Exploring the Sublethal Impacts of Cu and Zn on Daphnia magna: a transcriptomic perspective.

Berkay Paylar, Yared H Bezabhe, Jana Jass, Per-Erik Olsson

Abstract read

In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it

0cells of the map it votes in

0citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Berkay PaylarBiology, The Life Science Center, School of Science and Technology, Örebro University, SE-701 82, Örebro, Sweden.ORCID http://orcid.org/0000-0002-2299-5024

Yared H BezabheBiology, The Life Science Center, School of Science and Technology, Örebro University, SE-701 82, Örebro, Sweden.ORCID http://orcid.org/0000-0002-3160-876X

Jana JassBiology, The Life Science Center, School of Science and Technology, Örebro University, SE-701 82, Örebro, Sweden.ORCID http://orcid.org/0000-0001-7957-0310

Per-Erik OlssonBiology, The Life Science Center, School of Science and Technology, Örebro University, SE-701 82, Örebro, Sweden. per-erik.olsson@oru.se.ORCID http://orcid.org/0000-0001-7336-6335

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metal contamination of aquatic environments remains a major concern due to their persistence. The water flea Daphnia magna is an important model species for metal toxicity studies and water quality assessment. However, most research has focused on physiological endpoints such as mortality, growth, and reproduction in laboratory settings, as well as neglected toxicogenomic responses. Copper (Cu) and zinc (Zn) are essential trace elements that play crucial roles in many biological processes, including iron metabolism, connective tissue formation, neurotransmitter synthesis, DNA synthesis, and immune function. Excess amounts of these metals result in deviations from homeostasis and may induce toxic responses. In this study, we analyzed Daphnia magna transcriptomic responses to IC

Indexed as

CopperDaphniaTranscriptomeWater Pollutants, ChemicalZincAnimalsDaphnia magnaGene Expression ProfilingCopperWater Pollutants, ChemicalZincBiomarkerGene expressionTranscriptomics

Identifiers

PMID39160502

DOI10.1186/s12864-024-10701-8

PMCPMC11331620

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.