Evidence map›Paper›PMID 39157581›Full record

ArticleRSC advances2024

Molecular insight into binding affinities and blockade effects of selected flavonoid compounds on the PD-1/PD-L1 pathway.

Yan Guo, Jinchang Tong, Jianhuai Liang, Kaixin Shi, Xinyue Song, Zichao Guo, Boping Liu, Jianguo Xu

Abstract read
In one paragraph

Article in RSC advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yan GuoCollege of Food Science, Shanxi Normal University Taiyuan 030031 China xjg71@163.com.ORCID https://orcid.org/0000-0002-2721-7846
Jinchang TongCollege of Food Science, Shanxi Normal University Taiyuan 030031 China xjg71@163.com.
Jianhuai LiangKey Laboratory for Bio-based Materials and Energy of Ministry of Education, College of Materials and Energy, South China Agricultural University Guangzhou 510630 China boping@scau.edu.cn.
Kaixin ShiCollege of Food Science, Shanxi Normal University Taiyuan 030031 China xjg71@163.com.
Xinyue SongCollege of Food Science, Shanxi Normal University Taiyuan 030031 China xjg71@163.com.
Zichao GuoCollege of Food Science, Shanxi Normal University Taiyuan 030031 China xjg71@163.com.
Boping LiuKey Laboratory for Bio-based Materials and Energy of Ministry of Education, College of Materials and Energy, South China Agricultural University Guangzhou 510630 China boping@scau.edu.cn.
Jianguo XuCollege of Food Science, Shanxi Normal University Taiyuan 030031 China xjg71@163.com.ORCID https://orcid.org/0000-0002-7594-3316

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigated the binding mechanisms of the flavonoids apigenin (Api), kaempferol (Kmp), and quercetin (Que) to the PD-L1 dimer using a combination of molecular modeling and experimental techniques. The binding free energy results demonstrated that the flavonoids could tightly bind to the PD-L1 dimer, with the binding abilities following the trend Que > Kmp > Api. Key residues Ile54, Tyr56, Met115, Ala121, and Tyr123 were identified as important for binding. The flavonoids primarily bind to the C-, F-, and G-sheet domains. The spontaneous formation of the complex systems was mainly driven by hydrophobic forces. Dynamic cross-correlation matrix and secondary structure analyses further indicated that the studied flavonoids could stably interact with the binding sites. ELISA results showed that the flavonoids could effectively block PD-1/PD-L1 interactions, although the inhibitory activity of Api was weaker. Therefore, flavonols might be more effective inhibitors compared to flavones. The findings of this study are expected to contribute to the development of novel flavonoids targeting the PD-1/PD-L1 pathway.

Identifiers

PMID39157581
PMCPMC11328830

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.