Evidence map›Paper›PMID 39152498›Full record

ArticleBMC research notes2024

Phenotypic assessment of Cox10 variants and their implications for Leigh Syndrome.

Thomas-Shadi Voges, Eun Bi Lim, Abigail MacKenzie, Kyle Mudler, Rebecca DeSouza, Nmesoma E Onyejekwe, Stephen D Johnston

Abstract read
In one paragraph

Article in BMC research notes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Thomas-Shadi VogesDepartment of Biology, North Central College, Naperville, IL, USA.
Eun Bi LimDepartment of Biology, North Central College, Naperville, IL, USA.
Abigail MacKenzieDepartment of Biology, North Central College, Naperville, IL, USA.
Kyle MudlerDepartment of Biology, North Central College, Naperville, IL, USA.
Rebecca DeSouzaDepartment of Biology, North Central College, Naperville, IL, USA.
Nmesoma E OnyejekweDepartment of Biology, North Central College, Naperville, IL, USA.
Stephen D JohnstonDepartment of Biology, North Central College, Naperville, IL, USA. sdjohnston@noctrl.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesCox10 is an enzyme required for the activity of cytochrome c oxidase. Humans who lack at least one functional copy of Cox10 have a form of Leigh Syndrome, a genetic disease that is usually fatal in infancy. As more human genomes are sequenced, new alleles are being discovered; whether or not these alleles encode functional proteins remains unclear. Thus, we set out to measure the phenotypes of many human Cox10 variants by expressing them in yeast cells.

resultsWe successfully expressed the reference sequence and 25 variants of human Cox10 in yeast. We quantitated the ability of these variants to support growth on nonfermentable media and directly measured cytochrome c oxidase activity. 11 of these Cox10 variants supported approximately half or more the cytochrome c oxidase activity compared to the reference sequence. All of the strains containing those 11 variants also grew robustly using a nonfermentable carbon source. Cells expressing the other variants showed low cytochrome c oxidase activity and failed to grow on nonfermentable media.

Indexed as

Electron Transport Complex IVLeigh DiseasePhenotypeAlkyl and Aryl TransferasesGenetic VariationHumansMembrane ProteinsSaccharomyces cerevisiaeAlkyl and Aryl TransferasesCOX10 protein, humanElectron Transport Complex IVMembrane ProteinsCox10Cytochrome c oxidaseLeigh syndromeSaccharomyces cerevisiae

Identifiers

PMID39152498
PMCPMC11328382

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.