Evidence map›Paper›PMID 39152128›Full record

ArticleNature communications2024

ARID1 is required to regulate and reinforce H3K9me2 in sperm cells in Arabidopsis.

Lei Li, Huaihao Yang, Yi Zhao, Qianqian Hu, Xiaotuo Zhang, Ting Jiang, Hua Jiang, Binglian Zheng

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lei LiState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.ORCID 0000-0002-7134-7496
Huaihao YangState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Yi ZhaoState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Qianqian HuState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Xiaotuo ZhangState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Ting JiangState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.ORCID 0000-0001-6930-5193
Hua JiangThe Leibniz Institute for Plant Genetics and Crop Plant Research, Stadt Seeland, Germany.ORCID 0000-0002-7561-3085
Binglian ZhengState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China. zhengbl@fudan.edu.cn.ORCID 0000-0001-5650-5348

Funding

National Natural Science Foundation of China (National Science Foundation of China) 31830045National Natural Science Foundation of China (National Science Foundation of China) 32025005National Natural Science Foundation of China (National Science Foundation of China) 32100277National Natural Science Foundation of China (National Science Foundation of China) M-0398
6 · The paper itself

Abstract

Heterochromatin de-condensation in companion gametic cells is conserved in both plants and animals. In plants, microspore undergoes asymmetric pollen mitosis (PMI) to produce a vegetative cell (VC) and a generative cell (GC). Subsequently, the GC undergoes pollen mitosis (PMII) to produce two sperm cells (SC). Consistent with heterochromatin de-condensation in the VC, H3K9me2, a heterochromatin mark, is barely detected in VC. However, how H3K9me2 is differentially regulated during pollen mitosis remains unclear. Here, we show that H3K9me2 is gradually evicted from the VC since PMI but remain unchanged in the GC and SC. ARID1, a pollen-specific transcription factor that facilitates PMII, promotes H3K9me2 maintenance in the GC/SC but slows down its eviction in the VC. The genomic targets of ARID1 mostly overlaps with H3K9me2 loci, and ARID1 recruits H3K9 methyltransferase SUVH6. Our results uncover that differential pattern of H3K9me2 between two cell types is regulated by ARID1 during pollen mitosis.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantHistonesMitosisPollenTranscription FactorsDNA-Binding ProteinsHeterochromatinHistone-Lysine N-MethyltransferaseMethylationNuclear ProteinsArabidopsis ProteinsARID1 protein, ArabidopsisDNA-Binding ProteinsHeterochromatinHistone-Lysine N-MethyltransferaseHistonesNuclear ProteinsTranscription Factors

Identifiers

PMID39152128
PMCPMC11329518

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.