Evidence map›Paper›PMID 39149407›Full record

ArticlebioRxiv : the preprint server for biology2024

Nanoscale volumetric fluorescence imaging via photochemical sectioning.

Wei Wang, Xiongtao Ruan, Gaoxiang Liu, Daniel E Milkie, Wenping Li, Eric Betzig, Srigokul Upadhyayula, Ruixuan Gao

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Wei WangDepartment of Chemistry, University of Illinois Chicago; Chicago, IL 60607, USA.ORCID 0009-0007-3019-2479
Xiongtao RuanDepartment of Molecular and Cell Biology, University of California, Berkeley; Berkeley, CA 94720, USA.ORCID 0000-0001-5322-3249
Gaoxiang LiuDepartment of Molecular and Cell Biology, University of California, Berkeley; Berkeley, CA 94720, USA.ORCID 0000-0002-1001-0064
Daniel E MilkieHoward Hughes Medical Institute, Janelia Research Campus; Ashburn, VA 20417, USA.ORCID 0000-0002-3917-6965
Wenping LiDepartment of Chemistry, University of Illinois Chicago; Chicago, IL 60607, USA.
Eric BetzigDepartment of Molecular and Cell Biology, University of California, Berkeley; Berkeley, CA 94720, USA.ORCID 0000-0002-4192-1274
Srigokul UpadhyayulaDepartment of Molecular and Cell Biology, University of California, Berkeley; Berkeley, CA 94720, USA.ORCID 0000-0001-6727-5883
Ruixuan GaoDepartment of Chemistry, University of Illinois Chicago; Chicago, IL 60607, USA.ORCID 0000-0001-7137-2512

Funding

Functional and cell-type specific axonal pathways in the primate brainUG3MH126864 · NIMH · ALLEN INSTITUTE · PI REID, R CLAY · 2021 to 2023
$5.2M
NIMH NIH HHS UG3 MH126864
6 · The paper itself

Abstract

Optical nanoscopy of intact biological specimens has been transformed by recent advancements in hydrogel-based tissue clearing and expansion, enabling the imaging of cellular and subcellular structures with molecular contrast. However, existing high-resolution fluorescence microscopes have limited imaging depth, which prevents the study of whole-mount specimens without physical sectioning. To address this challenge, we developed "photochemical sectioning," a spatially precise, light-based sample sectioning process. By combining photochemical sectioning with volumetric lattice light-sheet imaging and petabyte-scale computation, we imaged and reconstructed axons and myelination sheaths across entire mouse olfactory bulbs at nanoscale resolution. An olfactory-bulb-wide analysis of myelinated and unmyelinated axons revealed distinctive patterns of axon degeneration and de-/dysmyelination in the neurodegenerative mouse, highlighting the potential for peta- to exabyte-scale super-resolution studies using this approach.

Identifiers

PMID39149407
PMCPMC11326139

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.