Evidence map›Paper›PMID 39148068›Full record

ArticleBMC microbiology2024

Linking watershed formation with the phylogenetic distribution of a soil microscopic fungus in Yunnan Province, China.

Davide Fornacca, Wei Deng, Yaoquan Yang, Fa Zhang, Xiaoyan Yang, Wen Xiao

Abstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Davide FornaccaInstitute of Eastern-Himalaya Biodiversity Research, Dali University, Hongsheng Rd. no. 2, Dali, 671003, Yunnan, China.ORCID http://orcid.org/0000-0002-2045-2800
Wei DengInstitute of Eastern-Himalaya Biodiversity Research, Dali University, Hongsheng Rd. no. 2, Dali, 671003, Yunnan, China.ORCID http://orcid.org/0000-0003-4918-7550
Yaoquan YangInstitute of Eastern-Himalaya Biodiversity Research, Dali University, Hongsheng Rd. no. 2, Dali, 671003, Yunnan, China.
Fa ZhangInstitute of Eastern-Himalaya Biodiversity Research, Dali University, Hongsheng Rd. no. 2, Dali, 671003, Yunnan, China.ORCID http://orcid.org/0000-0002-3749-2948
Xiaoyan YangInstitute of Eastern-Himalaya Biodiversity Research, Dali University, Hongsheng Rd. no. 2, Dali, 671003, Yunnan, China. yangxy@eastern-himalaya.cn.ORCID http://orcid.org/0000-0002-9304-308X
Wen XiaoInstitute of Eastern-Himalaya Biodiversity Research, Dali University, Hongsheng Rd. no. 2, Dali, 671003, Yunnan, China.ORCID http://orcid.org/0000-0002-4951-7524

Funding

National Natural Science Foundation of China 32360002National Natural Science Foundation of China U1602262Project for Talent and Platform of Science and Technology in Yunnan Province Science and Technology Department 202105AM070008Yunnan Intelligence Union Program 202203AM140016
6 · The paper itself

Abstract

backgroundPhylogeographic studies have gained prominence in linking past geological events to the distribution patterns of biodiversity, primarily in mountainous regions. However, such studies often focus on plant taxa, neglecting the intricate biogeographical patterns of microbes, particularly soil microbial communities. This article explores the spatial distribution of the nematode-trapping fungus Arthrobotrys oligospora, a widespread microorganism, in a tectonically active region at the southeastern edge of the Qinghai-Tibetan Plateau. By analysing the genetic variation of this fungus alongside the historical structure of major river watersheds, we sought to uncover potential connections between the two. Our study involved sampling 149 strains from 116 sites across six major watersheds in the region.

resultsThe resulting haplotype network revealed five distinct clusters, each corresponding closely to a specific watershed. These clusters exhibited high haplotype diversity and low nucleotide diversity, supporting the notion of watershed-based segregation. Further analysis of haplotypes shared across watersheds provided evidence for three proposed past river connections. In particular, we found numerous shared haplotypes between the Yangtze and Mekong basins, as well as between the Yangtze and the Red basins. Evidence for a Irrawaddy-Salween-Red and a Yangtze-Pearl-Red river connections were also portrayed in our mapping exercise.

conclusionsThese findings emphasize the crucial role of historical geomorphological events in shaping the biogeography of microbial biodiversity, alongside contemporary biotic and abiotic factors. Watershed perimeters emerged as effective predictors of such patterns, suggesting their suitability as analytical units for regional-scale studies. Our study also demonstrates the potential of microorganisms and phylogeographic approaches to complement traditional geological analyses, providing a more comprehensive understanding of past landscape structure and its evolution.

Indexed as

Genetic VariationHaplotypesPhylogenyPhylogeographyRiversSoil MicrobiologyAscomycotaBiodiversityChinaDNA, FungalDNA, FungalArthrobotrys oligosporaDrainage reorganisationMicrobial biogeographyNematode-trapping fungiPhylogeographic approachTectonic uplift

Identifiers

PMID39148068
PMCPMC11325569

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.