Evidence map›Paper›PMID 39146197›Full record

ArticleIUCrJ2024

On the structure refinement of metal complexes against 3D electron diffraction data using multipolar scattering factors.

Laura Pacoste, Vladislav Mikhailovich Ignat'ev, Paulina Maria Dominiak, Xiaodong Zou

Abstract read
In one paragraph

Article in IUCrJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. From atoms to a data bank: optimizing transferability of electron-density symmetry.Acta crystallographica. Section A, Foundations and advances · 2026
    Article
  2. Measurement of atomic scattering factors by cryoelectron microscopy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Journal of applied crystallography · 2026
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Laura PacosteDepartment of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden.ORCID 0009-0005-6090-8736
Vladislav Mikhailovich Ignat'evBiological and Chemical Research Center, Faculty of Chemistry, University of Warsaw, Warsaw, Poland.ORCID 0009-0002-6140-6576
Paulina Maria DominiakBiological and Chemical Research Center, Faculty of Chemistry, University of Warsaw, Warsaw, Poland.ORCID 0000-0002-1466-1243
Xiaodong ZouDepartment of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden.ORCID 0000-0001-6748-6656

Funding

Knut and Alice Wallenberg Foundations 2018.0237National Science Center, Poland 2020/39/I/ST4/02904Polish high-performance computing infrastructure PLGrid (HPC Centers: ACK Cyfronet AGH, WCSS) PLG/2023/016287Swedish Research Council 2019-00815
6 · The paper itself

Abstract

This study examines various methods for modelling the electron density and, thus, the electrostatic potential of an organometallic complex for use in crystal structure refinement against 3D electron diffraction (ED) data. It focuses on modelling the scattering factors of iron(III), considering the electron density distribution specific for coordination with organic linkers. We refined the structural model of the metal-organic complex, iron(III) acetylacetonate (FeAcAc), using both the independent atom model (IAM) and the transferable aspherical atom model (TAAM). TAAM refinement initially employed multipolar parameters from the MATTS databank for acetylacetonate, while iron was modelled with a spherical and neutral approach (TAAM ligand). Later, custom-made TAAM scattering factors for Fe-O coordination were derived from DFT calculations [TAAM-ligand-Fe(III)]. Our findings show that, in this compound, the TAAM scattering factor corresponding to Fe

Indexed as

3D ED3D electron diffractioncharge density distribution modellingelectron crystallographyindependent atom model limitationsorganometallic complexesquantum crystallographyTAAMtransferable aspherical atom model

Identifiers

PMID39146197
PMCPMC11364031

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.