Evidence map›Paper›PMID 39145837›Full record

ArticleCurrent medical science2024

Gene Expression Profile Identifies LncRNA AL355974.3 As a Potential Glioma Biomarker.

Hao-Tian Lu, Yu-Yang Chen, Yong-Jia Yu, Xing-Sheng Liao, Hui Liang, Lun Liang, Pan-Lin Mo, Xin-Kai Huang, Shuai Ding, Chang Liu and 1 more

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Article in Current medical science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Hao-Tian Lu *Department of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Yu-Yang Chen *Department of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Yong-Jia YuDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Xing-Sheng LiaoDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Hui LiangDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Lun LiangDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Pan-Lin MoDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Xin-Kai HuangDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Shuai DingDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China.
Chang LiuDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China. 249738984@qq.com.
Da-Qin FengDepartment of Neurosurgery, The First Affiliated Hospital, Guangxi Medical University, Nanning, 530021, China. 13807713918@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveGlioma is a central nervous system tumor arising from glial cells. Despite significant advances in diagnosis and treatment, most patients with high-grade gliomas have a poor prognosis. Many studies have shown that long noncoding RNAs (lncRNAs) may play important roles in the development, progression and treatment of many tumors, including gliomas. Molecularly targeted therapy may be a new direction for the adjuvant treatment of glioma. Therefore, we hope that by studying differentially expressed lncRNAs (DElncRNAs) in glioma, we can discover lncRNAs that can serve as biomarkers for glioma and provide better therapeutic modalities for glioma patients.

methodsFirst, the expression of lncRNAs in 5 normal brain (NB) tissues and 10 glioma tissues was examined by RNA sequencing (RNA-seq). Next, we performed Kaplan-Meier analysis of data from The Cancer Genome Atlas (TCGA) database to assess the prognostic value of these variables. Finally, functional analysis of the DElncRNAs was performed by means of Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis.

resultsRNA sequencing analysis revealed 85 upregulated miRNAs and 71 downregulated lncRNAs in low-grade glioma (LGG) and 50 upregulated lncRNAs and 70 downregulated lncRNAs in glioblastoma (GBM). Among them, AL355974.3 was the most upregulated lncRNA. LINC00632 was the most downregulated lncRNA. Second, LGG patients with higher AL355974.3 expression had worse overall survival according to Kaplan-Meier analysis of the TCGA database. Finally, bioinformatics analysis revealed that the target genes of these DElncRNAs were enriched in various biological processes and signaling pathways, such as cell metabolic and developmental processes.

conclusionOur findings provide evidence that AL355974.3 may be a new biomarker for glioma.

Indexed as

Biomarkers, TumorBrain NeoplasmsGene Expression Regulation, NeoplasticGliomaRNA, Long NoncodingFemaleGene Expression ProfilingGene OntologyHumansKaplan-Meier EstimateMaleMicroRNAsMiddle AgedPrognosisTranscriptomeBiomarkers, TumorMicroRNAsRNA, Long Noncodingbiomarkergliomalong noncoding RNAsRNA sequencing

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.