Evidence map›Paper›PMID 39145091›Full record

ArticleTranslational cancer research2024

SOX11 as a prognostic biomarker linked to m6A modification and immune infiltration in renal clear cell carcinoma.

Kaihong Wang, Xinpeng Chen, Yifu Liu, Xuan Meng, Libo Zhou

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Article in Translational cancer research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Kaihong Wang *Department of Urology, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Xinpeng Chen *The First Clinical Medical College, Jiangxi Medical College, Nanchang University, Nanchang, China.
Yifu LiuDepartment of Urology, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Xuan MengDepartment of Pathology, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Libo ZhouDepartment of Urology, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The prognosis for patients with kidney renal clear cell carcinoma (KIRC) remains unfavorable, and the understanding of SRY-box transcription factor 11 (SOX11) in KIRC is still limited. The purpose of this paper is to explore the role of SOX11 in the prognosis of KIRC. Methods: We analyzed SOX11 expression in KIRC and adjacent normal tissues using The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases. Our study aims to establish a correlation between SOX11 expression and clinical pathological features. Differentially expressed genes (DEGs) were assessed using R software. Furthermore, we conducted Gene Ontology (GO)/Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses and gene set enrichment analysis (GSEA). Integration of data from the Tumor Immune Estimation Resource (TIMER) and TCGA databases allowed us to assess the association between SOX11 expression and immune infiltration in KIRC. Additionally, we analyzed the association between Results: Our findings revealed high SOX11 expression in KIRC, which showed a significant correlation with tumor staging and prognosis. GO/KEGG and GSEA analyses indicated that SOX11 was closely associated with sodium ion transport, synaptic vesicle circulation, and oxidative phosphorylation. Analysis of the TIMER and TCGA databases demonstrated correlations of SOX11 expression levels with the presence of CD8 Conclusions: SOX11 exhibits a correlation with m6A modification and immune infiltration, suggesting its potential as a prognostic biomarker for KIRC.

Indexed as

immune infiltrationkidney renal clear cell carcinoma (KIRC)N6-methyladenosine modification (m6A modification)prognostic biomarkerSRY-box transcription factor 11 (SOX11)

Identifiers

PMID39145091
PMCPMC11319951

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