Evidence map›Paper›PMID 39144483›Full record

ArticleFrontiers in bioengineering and biotechnology2024

High-throughput detection of potential bacteriocin producers in a large strain library using live fluorescent biosensors.

Sebastian J Otto, Laura Teichmann, Niklas Fante, Peter Crauwels, Alexander Grünberger, Tobias Neddermann, Christian U Riedel

Abstract read
In one paragraph

Article in Frontiers in bioengineering and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sebastian J OttoDepartment of Biology, University of Ulm, Ulm, Germany.
Laura TeichmannNovaTaste Production GmbH, Holdorf, Germany.
Niklas FanteMultiscale Bioengineering, Technical Faculty, Bielefeld University, Bielefeld, Germany.
Peter CrauwelsDepartment of Biology, University of Ulm, Ulm, Germany.
Alexander GrünbergerMultiscale Bioengineering, Technical Faculty, Bielefeld University, Bielefeld, Germany.
Tobias NeddermannNovaTaste Production GmbH, Holdorf, Germany.
Christian U RiedelDepartment of Biology, University of Ulm, Ulm, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The global increase in antibiotic resistances demands for additional efforts to identify novel antimicrobials such as bacteriocins. These antimicrobial peptides of bacterial origin are already used widely in food preservation and promising alternatives for antibiotics in animal feed and some clinical setting. Identification of novel antimicrobials is facilitated by appropriate high throughput screening (HTS) methods. Previously, we have described a rapid, simple and cost-efficient assay based on live biosensor bacteria for detection of antimicrobial compounds that act on membrane integrity using the ratiometric pH-dependent fluorescent protein pHluorin2 (pHin2). Here, we use these biosensors to develop an integrated pipeline for high-throughput identification of bacteriocin producers and their biosynthetic gene clusters. We extend the existing portfolio of biosensors by generating pHin2 expressing strains of

Indexed as

bacteriocinbiosensorsfluorescencehigh-throughput screeninglactic acid bacteria

Identifiers

PMID39144483
PMCPMC11321961

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.