Evidence map›Paper›PMID 39144078›Full record

ArticleFrontiers in veterinary science2024

High-throughput rapid amplicon sequencing for multilocus sequence typing of

Isaac Framst, Rebecca M Wolking, Justin Schonfeld, Nicole Ricker, Janet Beeler-Marfisi, Gabhan Chalmers, Pauline L Kamath, Grazieli Maboni

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in veterinary science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Isaac FramstDepartment of Pathobiology, Ontario Veterinary College, University of Guelph, Guelph, ON, Canada.
Rebecca M WolkingWashington Animal Disease Diagnostic Lab, Washington State University, Pullman, WA, United States.
Justin SchonfeldPublic Health Agency of Canada, Guelph, ON, Canada.
Nicole RickerDepartment of Pathobiology, Ontario Veterinary College, University of Guelph, Guelph, ON, Canada.
Janet Beeler-MarfisiDepartment of Pathobiology, Ontario Veterinary College, University of Guelph, Guelph, ON, Canada.
Gabhan ChalmersDepartment of Pathobiology, Ontario Veterinary College, University of Guelph, Guelph, ON, Canada.
Pauline L KamathSchool of Food and Agriculture, University of Maine, Orono, ME, United States.
Grazieli MaboniAthens Veterinary Diagnostic Laboratory, College of Veterinary Medicine, University of Georgia, Athens, GA, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Spillover events of Methods: Our study aimed to develop and validate an MLST workflow for typing of Results: Sequences recovered from Nanopore Rapid Barcoding correctly identified all MLST types with the shortest total workflow time and lowest cost per sample when compared with Nanopore Native Barcoding and Illumina MiSeq methods. Discussion: Our proposed workflow is a convenient and effective method for strain typing of

Indexed as

bacterial typing techniques/methodslong-read sequencingMycoplasma ovineumoniaesheep respiratory diseaseshort-read sequencing

Identifiers

PMID39144078
PMCPMC11322507

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.