Evidence map›Paper›PMID 39143966›Full record

ReviewReports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology2024

The RNA world: from experimental laboratory to "in silico" approach. Part 1: User friendly RNA expression databases portals.

Tomasz Kolenda, Marianna Śmiełowska, Julia Lipowicz, Julia Ostapowicz, Paula Pacześna, Monika Anna Rosochowicz, Paulina Poter, Joanna Kozłowska-Masłoń, Kacper Guglas, Klaudia Dudek and 6 more

Abstract readReview
In one paragraph

Review in Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Biomedicines · 2026
    Article
  2. lncRNA EGOT across cancers: TCGA analysis.Archives of medical science : AMS · 2026
    Article
  3. Review
  4. Review
  5. lncRNABiomedicines · 2025
    Article
  6. Exploring vimentin expression and its protein interactors across diverse cancer types via the cancer genome atlas datasets: a comprehensive analysis.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2025
    Article
  7. Pseudogenes in the carcinogenesis: epithelial-to-mesenchymal transition process and cancer initiating cells.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2025
    Review
  8. Transcriptome-based model for predicting radiotherapy response in HNSCC patients.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2025
    Article
  9. Nucleus Accumbens Associated Protein 1 in Cancers-The Real Value.International journal of molecular sciences · 2024
    Article
  10. Diagnostic Potential ofInternational journal of molecular sciences · 2024
    Article
  11. Article
  12. Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Tomasz KolendaLaboratory of Cancer Genetics, Greater Poland Cancer Center, Poznan, Poland.
Marianna ŚmiełowskaDepartment of Genome Engineering, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.
Julia LipowiczDepartment of Histology and Embryology, Poznan University of Medical Sciences, Poznan, Poland.
Julia OstapowiczDepartment of Electroradiology, Poznan University of Medical Sciences, Poznan, Poland.
Paula PacześnaGreater Poland Cancer Center, Research and Implementation Unit, Poznan, Poland.
Monika Anna RosochowiczRadiobiology Laboratory, Department of Medical Physics, Greater Poland Cancer Centre, Poznan, Poland.
Paulina PoterDepartment of Tumor Pathology and Prophylactics, Poznan University of Medical Sciences, Poznan, Poland.
Joanna Kozłowska-MasłońLaboratory of Cancer Genetics, Greater Poland Cancer Center, Poznan, Poland.
Kacper GuglasLaboratory of Cancer Genetics, Greater Poland Cancer Center, Poznan, Poland.
Klaudia DudekLaboratory of Cancer Genetics, Greater Poland Cancer Center, Poznan, Poland.
Nina GrzejdaLaboratory of Cancer Genetics, Greater Poland Cancer Center, Poznan, Poland.
Katarzyna RegulskaGreater Poland Cancer Center, Research and Implementation Unit, Poznan, Poland.
Anna FlorczakDepartment of Diagnostics and Cancer Immunology, Greater Poland Cancer Center, Poznan, Poland.
Urszula KazimierczakDepartment of Diagnostics and Cancer Immunology, Greater Poland Cancer Center, Poznan, Poland.
Katarzyna LamperskaLaboratory of Cancer Genetics, Greater Poland Cancer Center, Poznan, Poland.
Anna TeresiakLaboratory of Cancer Genetics, Greater Poland Cancer Center, Poznan, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cellular information about "life instruction" is stored, transferred, and modified using different types of RNA molecules. During the last decades, a growing number of RNA data has been generated thanks to the development of microarray chips and next-generation sequencing (NGS) methods. Improvement of bioinformatics contributed to the discovery of many types of new non-coding RNAs (ncRNAs), mostly with regulatory functions that supplemented the knowledge about the world of RNA. All of it, as well as the Human Genome Project (HGP) and the Cancer Genome Atlas (TCGA) project, has resulted in the formation of data storage and analysis portals which are widely used in cancer research and moved science from

Indexed as

analysisbiomarkerscancercoding- and non-coding RNAdatabasesRNATCGA

Identifiers

PMID39143966
PMCPMC11321768

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.