Evidence map›Paper›PMID 39143511›Full record

ArticleBMC infectious diseases2024

Development and evaluation of a rapid diagnostic method for Sporothrix globosa in Asia using quantitative real-time PCR.

Hanqing Geng, Lele Sun, Chuan Wang, Yong Zhang, Shufen Wang, Yanru Cheng, Fangfang Bao, Hong Liu, Furen Zhang

Abstract readEvaluation Study
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hanqing GengHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China.
Lele SunHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China.
Chuan WangHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China.
Yong ZhangHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China.
Shufen WangHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China.
Yanru ChengHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China.
Fangfang BaoHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China. baofangfang2008@163.com.
Hong LiuHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China. hongyue2519@hotmail.com.
Furen ZhangHospital for Skin Diseases, Shandong First Medical University, Jinan, Shandong, China.

Funding

National Natural Science Foundation of China 82003369Taishan Scholar Project of Shandong Province tsqn202211345
6 · The paper itself

Abstract

backgroundSporotrichosis is a chronic granulomatous infection of the skin and subcutaneous tissue that can affect any organ through lymphatic spread. The prevalence of sporotrichosis infections is increasing and its treatment is challenging as there are no unified and standard diagnostic techniques or antifungal medications. Controlling further spread requires a rapid diagnosis. Assessment of clinical symptoms, histological analysis, serological testing, and pathogen culture are all necessary for the diagnosis of sporotrichosis. However, these procedures are unable to identify the species. The development of safe, reliable, and species-specific diagnostic techniques is essential.

objectiveTo establish and evaluate a new quantitative real-time PCR assay for the rapid diagnosis of sporotrichosis and to identify relevant species.

methodsPolymorphisms in calmodulin (CAL) gene sequences and the internal transcribed spacer (ITS) were used in a quantitative real-time PCR assay to identify S. globosa, S. schenckii, and non-target species.

resultsThe quantitative real-time PCR assay had 100% sensitivity and specificity. The limit of detection was 6 fg/µl. Thirty-four clinical specimens were verified to be infected with S. globosa with a 100% positive detection rate.

conclusionsThe quantitative PCR technique developed in this study is a quick, accurate, and targeted method of identifying S. globosa based on polymorphisms in CAL sequences and ITS. It can be used for a prompt clinical diagnosis to identify S. globosa in clinical specimens from patients with sporotrichosis.

Indexed as

CalmodulinReal-Time Polymerase Chain ReactionSensitivity and SpecificitySporothrixSporotrichosisAsiaDNA, FungalHumansMolecular Diagnostic TechniquesRapid Diagnostic TestsCalmodulinDNA, FungalDiagnosisQuantitative PCRSporothrix globosa

Identifiers

PMID39143511
PMCPMC11323652

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.