Evidence map›Paper›PMID 39142279›Full record

ArticleMolecular cell2024

HLTF resolves G4s and promotes G4-induced replication fork slowing to maintain genome stability.

Gongshi Bai, Theresa Endres, Ulrike Kühbacher, Valentina Mengoli, Briana H Greer, Emma M Peacock, Matthew D Newton, Tyler Stanage, Maria Rosaria Dello Stritto, Roxana Lungu and 7 more

Abstract read
In one paragraph

Article in Molecular cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Gongshi BaiDepartment of Chemical & Systems Biology, Stanford University, Stanford, CA 94305, USA.
Theresa EndresDepartment of Chemical & Systems Biology, Stanford University, Stanford, CA 94305, USA.
Ulrike KühbacherDepartment of Chemical & Systems Biology, Stanford University, Stanford, CA 94305, USA.
Valentina MengoliInstitute for Research in Biomedicine, Università della Svizzera italiana, Bellinzona 6500, Switzerland.
Briana H GreerDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA.
Emma M PeacockDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA.
Matthew D NewtonDSB Repair Metabolism Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Tyler StanageDSB Repair Metabolism Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Maria Rosaria Dello StrittoInstitute for Research in Biomedicine, Università della Svizzera italiana, Bellinzona 6500, Switzerland.
Roxana LunguDepartment of Chemical & Systems Biology, Stanford University, Stanford, CA 94305, USA.
Magdalena P CrossleyDepartment of Chemical & Systems Biology, Stanford University, Stanford, CA 94305, USA.
Ataya SathirachindaDepartment of Chemical & Systems Biology, Stanford University, Stanford, CA 94305, USA.
David CortezDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37232, USA.
Simon J BoultonDSB Repair Metabolism Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Petr CejkaInstitute for Research in Biomedicine, Università della Svizzera italiana, Bellinzona 6500, Switzerland.
Brandt F EichmanDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA; Department of Biochemistry, Vanderbilt University, Nashville, TN 37232, USA.
Karlene A CimprichDepartment of Chemical & Systems Biology, Stanford University, Stanford, CA 94305, USA. Electronic address: cimprich@stanford.edu.

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
Regulation of the DNA Damage ResponseR01ES016486 · NIEHS · STANFORD UNIVERSITY · PI CIMPRICH, KARLENE A · 2007 to 2025
$6.2M
Analysis of the Replication Stress ResponseR01GM116616 · NIGMS · VANDERBILT UNIVERSITY · PI David K Cortez · 2015 to 2026
$5.4M
The DNA replication-repair interface: mechanisms and regulationR35GM136401 · NIGMS · VANDERBILT UNIVERSITY · PI Brandt F Eichman · 2020 to 2026
$4.3M
ImageXpress Micro (IXM) Confocal High-content Imaging SystemS10OD026899 · OD · STANFORD UNIVERSITY · PI SOLOW-CORDERO, DAVID EDWARD · 2019 to 2019
$541k
Regulation of the DNA damage ResponseR56ES016486 · NIEHS · STANFORD UNIVERSITY · PI CIMPRICH, KARLENE A · 2024 to 2024
$500k
Cancer Research UK CC2057NCI NIH HHS P01 CA092584NIEHS NIH HHS R01 ES016486NIEHS NIH HHS R56 ES016486NIGMS NIH HHS R01 GM116616NIGMS NIH HHS R35 GM136401NIGMS NIH HHS T32 GM008320NIH HHS S10 OD026899Swiss National Science Foundation 310030_207588 AND 310030_205199Wellcome Trust CC2098
6 · The paper itself

Abstract

G-quadruplexes (G4s) form throughout the genome and influence important cellular processes. Their deregulation can challenge DNA replication fork progression and threaten genome stability. Here, we demonstrate an unexpected role for the double-stranded DNA (dsDNA) translocase helicase-like transcription factor (HLTF) in responding to G4s. We show that HLTF, which is enriched at G4s in the human genome, can directly unfold G4s in vitro and uses this ATP-dependent translocase function to suppress G4 accumulation throughout the cell cycle. Additionally, MSH2 (a component of MutS heterodimers that bind G4s) and HLTF act synergistically to suppress G4 accumulation, restrict alternative lengthening of telomeres, and promote resistance to G4-stabilizing drugs. In a discrete but complementary role, HLTF restrains DNA synthesis when G4s are stabilized by suppressing primase-polymerase (PrimPol)-dependent repriming. Together, the distinct roles of HLTF in the G4 response prevent DNA damage and potentially mutagenic replication to safeguard genome stability.

Indexed as

DNA-Binding ProteinsDNA PrimaseDNA ReplicationGenomic InstabilityG-QuadruplexesMutS Homolog 2 ProteinTranscription FactorsDNA DamageDNA-Directed DNA PolymeraseHEK293 CellsHumansMultifunctional EnzymesTelomere HomeostasisDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA PrimaseHLTF protein, humanMSH2 protein, humanMultifunctional EnzymesMutS Homolog 2 ProteinPrimPol protein, humanTranscription Factorsalternative lengthening of telomeresDNA replication stress responseDNA translocasegenome stabilityG-quadruplexHLTFMSH2nucleic acid secondary structurePrimPolRNA-DNA hybrid

Identifiers

PMID39142279
PMCPMC11366124

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.