Evidence map›Paper›PMID 39141739›Full record

ArticleScience advances2024

Origin, structure, and composition of the spider major ampullate silk fiber revealed by genomics, proteomics, and single-cell and spatial transcriptomics.

Sumalata Sonavane, Sameer Hassan, Urmimala Chatterjee, Lucile Soler, Lena Holm, Annelie Mollbrink, Gabriele Greco, Noah Fereydouni, Olga Vinnere Pettersson, Ignas Bunikis and 5 more

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Liquid-liquid phase separation enables chromatography-free purification and high-performance spidroin-amyloid hybrid silk fibers.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Spider silk-based structural proteins as tough, biodegradable, and sustainable polymers.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2026
    Review
  8. Nanostructured Protein Surfaces Inspired by Spider Silk.Advanced materials (Deerfield Beach, Fla.) · 2025
    Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Sumalata SonavaneDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID 0000-0002-0728-4822
Sameer HassanDepartment of Biosciences and Nutrition, Karolinska Institutet, Neo, Huddinge, Sweden.
Urmimala ChatterjeeDepartment of Biosciences and Nutrition, Karolinska Institutet, Neo, Huddinge, Sweden.ORCID 0000-0002-6681-1696
Lucile SolerNational Bioinformatics Infrastructure Sweden (NBIS), Science for Life Laboratory (SciLifeLab), Uppsala University, Uppsala, Sweden.ORCID 0000-0002-0121-2393
Lena HolmDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID 0000-0002-7717-4370
Annelie MollbrinkDepartment of Gene Technology, KTH Royal Institute of Technology, SciLifeLab, Stockholm, Sweden.ORCID 0009-0007-0542-0695
Gabriele GrecoDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID 0000-0003-3356-7081
Noah FereydouniDepartment of Biosciences and Nutrition, Karolinska Institutet, Neo, Huddinge, Sweden.ORCID 0000-0002-1786-4337
Olga Vinnere PetterssonDepartment of Immunology, Genetics and Pathology, National Genomics Infrastructure, SciLifeLab, Uppsala, Sweden.ORCID 0000-0002-5597-1870
Ignas BunikisDepartment of Immunology, Genetics and Pathology, National Genomics Infrastructure, SciLifeLab, Uppsala, Sweden.
Allison ChurcherDepartment of Molecular Biology, NBIS, SciLifeLab, Umeå University, Umeå, Sweden.ORCID 0000-0003-1902-3002
Henrik LantzNational Bioinformatics Infrastructure Sweden (NBIS), Science for Life Laboratory (SciLifeLab), Uppsala University, Uppsala, Sweden.
Jan JohanssonDepartment of Biosciences and Nutrition, Karolinska Institutet, Neo, Huddinge, Sweden.
Johan ReimegårdNational Bioinformatics Infrastructure Sweden (NBIS), Science for Life Laboratory (SciLifeLab), Uppsala University, Uppsala, Sweden.ORCID 0000-0003-1518-2014
Anna RisingDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID 0000-0002-1872-1207

Funding

European Research Council
6 · The paper itself

Abstract

Spiders produce nature's toughest fiber using renewable components at ambient temperatures and with water as solvent, making it highly interesting to replicate for the materials industry. Despite this, much remains to be understood about the bioprocessing and composition of spider silk fibers. Here, we identify 18 proteins that make up the spiders' strongest silk type, the major ampullate fiber. Single-cell RNA sequencing and spatial transcriptomics revealed that the secretory epithelium of the gland harbors six cell types. These cell types are confined to three distinct glandular zones that produce specific combinations of silk proteins. Image analysis of histological sections showed that the secretions from the three zones do not mix, and proteomics analysis revealed that these secretions form layers in the final fiber. Using a multi-omics approach, we provide substantial advancements in the understanding of the structure and function of the major ampullate silk gland as well as of the architecture and composition of the fiber it produces.

Indexed as

SilkSpidersAnimalsCluster AnalysisGene Expression ProfilingGenomicsProteomicsSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisSolventsTranscriptomeSilkSolvents

Identifiers

PMID39141739
PMCPMC11323941

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.