Evidence map›Paper›PMID 39141632›Full record

ArticlePloS one2024

Antimicrobial potentials of Pandanus amaryllifolius Roxb.: Phytochemical profiling, antioxidant, and molecular docking studies.

Dwi Kusuma Wahyuni, Gita Aqila Nuha, Tope Gafar Atere, Viol Dhea Kharisma, Vinaya Satyawan Tari, Cici Tya Rahmawati, Ahmad Affan Ali Murtadlo, Alvi Jauharotus Syukriya, Sumrit Wacharasindu, Sehanat Prasongsuk and 1 more

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Dwi Kusuma WahyuniDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga Surabaya, Surabaya, East Java, Indonesia.ORCID 0000-0002-1149-1103
Gita Aqila NuhaDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga Surabaya, Surabaya, East Java, Indonesia.
Tope Gafar AtereDepartment of Medical Biochemistry, College of Health Sciences, Osun State University, Osogbo, Nigeria.
Viol Dhea KharismaDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga Surabaya, Surabaya, East Java, Indonesia.
Vinaya Satyawan TariDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga Surabaya, Surabaya, East Java, Indonesia.ORCID 0000-0002-8352-252X
Cici Tya RahmawatiDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga Surabaya, Surabaya, East Java, Indonesia.ORCID 0009-0007-7460-608X
Ahmad Affan Ali MurtadloDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga Surabaya, Surabaya, East Java, Indonesia.
Alvi Jauharotus SyukriyaProgram in Biotechnology, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Sumrit WacharasinduDepartment of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Sehanat PrasongsukPlant and Biomass Utilization Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Hery PurnobasukiDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga Surabaya, Surabaya, East Java, Indonesia.ORCID 0000-0002-0562-2058

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of antimicrobial resistance has led to an urgent need for novel antimicrobial drugs. This study aimed to determine the antioxidant and antimicrobial potentials in silico and in vitro of Pandanus amaryllifolius Roxb. ethanolic extract. The extracts were subjected to gas chromatography-mass spectrometry (GC-MS) analysis to identify the compounds. In silico antimicrobial studies were performed to gain insights into the possible mechanism of action of the active compounds as antimicrobials. The antimicrobial activities of the ethanolic extracts were assessed using the agar well diffusion method against the Surabaya strain of Escherichia coli and Staphylococcus aureus. Antioxidant properties of the extract were done using DPPH (2,2-diphenyl-1-picryl-hydrazyl-hydrate) and ABTS [2,2'-azino-bis (3-ethylbenzthiazoline-6-sulphonic acid)] inhibition assays. The phytochemical screening revealed that the extract has high flavonoids and polyphenols contents. The GC-MS analysis detected the presence of 52 bioactive substances, with n-hexadecanoic acid, 9, 12, 15-octadecatrienoic acid, benzofuran 2,3-dihydro-. quinic acid, neophytadiene as major compound. Molecular docking studies showed that these compounds have a high binding affinity towards the target proteins, thereby inhibiting their activities. The ethanolic extract of P. amaryllifolius Roxb. exhibited antioxidant and antimicrobial activities. The IC50 were 11.96 ± 4.01 μg/ml and 26.18 ± 7.44 μg/ml for DPPH and ABTS. The diameters of inhibition zones (DIZ) and percentage of inhibition (PI) were calculated and varied for every single pathogen 16.44 ± 1.21mm/66.76 ± 4.92% (50%) and 21.22 ± 0.11mm/82.49 ± 3.91% (50%) for E. coli and S. aureus (DIZ/PI) respectively. Overall, this study provides information on the mechanism responsible for P. amaryllifolius Roxb. extract as a natural antimicrobe and lays the foundation for further studies to isolate and characterize the active compounds as antimicrobial candidates.

Indexed as

AntioxidantsEscherichia coliMolecular Docking SimulationPhytochemicalsPlant ExtractsStaphylococcus aureusAnti-Bacterial AgentsAnti-Infective AgentsGas Chromatography-Mass SpectrometryMicrobial Sensitivity TestsAnti-Bacterial AgentsAnti-Infective AgentsAntioxidantsPhytochemicalsPlant Extracts

Identifiers

PMID39141632
PMCPMC11324095

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.