Evidence map›Paper›PMID 39141348›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Zfp697 is an RNA-binding protein that regulates skeletal muscle inflammation and remodeling.

Jorge C Correia, Paulo R Jannig, Maya L Gosztyla, Igor Cervenka, Serge Ducommun, Stine M Præstholm, José M Dias, Kyle D Dumont, Zhengye Liu, Qishan Liang and 11 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Decoding Human Placental Cellular and Molecular Responses to Obesity and Fetal Growth.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Zfp697 is an RNA-binding protein that regulates skeletal muscle inflammation and remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors.

Jorge C CorreiaMolecular and Cellular Exercise Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.
Paulo R JannigMolecular and Cellular Exercise Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.
Maya L GosztylaDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92093.
Igor CervenkaMolecular and Cellular Exercise Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.
Serge DucommunMolecular and Cellular Exercise Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.ORCID 0000-0002-9230-8867
Stine M PræstholmMolecular and Cellular Exercise Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.
José M DiasNanomedicine and Spatial Biology, Department of Physiology and Pharmacology, Biomedicum, Karolinska, Stockholm SE-171 77, Sweden.ORCID 0000-0002-1402-0323
Kyle D DumontMolecular and Cellular Exercise Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.ORCID 0009-0009-4480-301X
Zhengye LiuMolecular Muscle Physiology and Pathophysiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.
Qishan LiangDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92093.
Daniel EdsgärdScience for Life Laboratory, Department of Gene Technology, School of Engineering Sciences in Biotechnology, Chemistry and Health, KTH Royal Institute of Technology, Stockholm SE-100 44, Sweden.
Olof EmanuelssonScience for Life Laboratory, Department of Gene Technology, School of Engineering Sciences in Biotechnology, Chemistry and Health, KTH Royal Institute of Technology, Stockholm SE-100 44, Sweden.ORCID 0000-0002-8879-9245
Paul GregorevicCentre for Muscle Research, Department of Anatomy and Physiology, School of Biomedical Sciences, The University of Melbourne, Parkville, VIC 3010, Australia.ORCID 0000-0002-7418-8945
Håkan WesterbladMuscle Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.ORCID 0000-0002-8180-3029
Tomas VenckunasInstitute of Sports Science and Innovations, Lithuanian Sports University, Kaunas 44221, Lithuania.
Marius BrazaitisInstitute of Sports Science and Innovations, Lithuanian Sports University, Kaunas 44221, Lithuania.
Sigitas KamandulisInstitute of Sports Science and Innovations, Lithuanian Sports University, Kaunas 44221, Lithuania.ORCID 0000-0001-6476-1069
Johanna T LannerMolecular Muscle Physiology and Pathophysiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.ORCID 0000-0002-1222-9473
Ana I TeixeiraNanomedicine and Spatial Biology, Department of Physiology and Pharmacology, Biomedicum, Karolinska, Stockholm SE-171 77, Sweden.
Gene W YeoDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92093.
Jorge L RuasMolecular and Cellular Exercise Physiology, Department of Physiology and Pharmacology, Biomedicum, Karolinska Institutet, Stockholm SE-171 77, Sweden.ORCID 0000-0002-1110-2606

Funding

Functional RNA elements in the human genomeR01HG004659 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Kevin Daniel Corbett, Eugene Wei-Ming Yeo · 2008 to 2026
$12.4M
A Comprehensive Functional Map of Human Protein-RNA InteractionsU41HG009889 · NHGRI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRAVELEY, BRENTON R. · 2018 to 2021
$9.4M
A comprehensive binding and functional map of human RNA-binding proteinsU24HG009889 · NHGRI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRAVELEY, BRENTON R., YEO, EUGENE WEI-MING · 2022 to 2025
$5.5M
STAMP technology to enable single-cell and isoform-sensitive detection of RBP sitesR01HG011864 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YEO, EUGENE WEI-MING · 2021 to 2024
$4.0M
Dissecting stress granule dependencies in leukemia stem cellsR01CA273432 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI John T Chang, Eugene Wei-Ming Yeo · 2023 to 2026
$1.8M
AFM-Tèlèthon N/AÅke Wibergs Foundatio N/AAmerican Heart Association (AHA) N/AAmerican Heart Association-American Stroke Association 23PRE1025605Association for Women in Science (AWIS) N/AEuropean Foundation for the Study of Diabetes (EFSD) N/AGösta Fraenckel Foundation for Medical Research N/AMyotonic Dystrophy Foundation (MDF) N/ANational Health and Medical Research Council of Australia 1117835 and 2017070NCI NIH HHS R01 CA273432NHGRI NIH HHS R01 HG004659NHGRI NIH HHS R01 HG011864NHGRI NIH HHS U24 HG009889NHGRI NIH HHS U41 HG009889NIH HHS U41HG009889 RF1MH126719 R01NS103172 R01HG004659 and R01HG011864Novo Nordisk Fonden (NNF) NNF16OC0020804Novo Nordisk Fonden (NNF) NNF22OC0075245NSF | National Science Foundation Graduate Research Fellowship Program (GRFP) DGE-2038238Swedish Society for Medical Research N/ASwiss National Science Foundation N/AThe Research Council of Lithuania S-MIP-19-54Vetenskapsrådet (VR) 2016-00785Vetenskapsrådet (VR) 2019-01282/ 2022-01650 and 207-0479Vetenskapsrådet (VR) 80358701-03
6 · The paper itself

Abstract

Skeletal muscle atrophy is a morbidity and mortality risk factor that happens with disuse, chronic disease, and aging. The tissue remodeling that happens during recovery from atrophy or injury involves changes in different cell types such as muscle fibers, and satellite and immune cells. Here, we show that the previously uncharacterized gene and protein Zfp697 is a damage-induced regulator of muscle remodeling. Zfp697/ZNF697 expression is transiently elevated during recovery from muscle atrophy or injury in mice and humans. Sustained Zfp697 expression in mouse muscle leads to a gene expression signature of chemokine secretion, immune cell recruitment, and extracellular matrix remodeling. Notably, although Zfp697 is expressed in several cell types in skeletal muscle, myofiber-specific Zfp697 genetic ablation in mice is sufficient to hinder the inflammatory and regenerative response to muscle injury, compromising functional recovery. We show that Zfp697 is an essential mediator of the interferon gamma response in muscle cells and that it functions primarily as an RNA-interacting protein, with a very high number of miRNA targets. This work identifies Zfp697 as an integrator of cell-cell communication necessary for tissue remodeling and regeneration.

Indexed as

Muscle, SkeletalRNA-Binding ProteinsAnimalsHumansInflammationInterferon-gammaMiceMice, Inbred C57BLMice, KnockoutMicroRNAsMuscular AtrophyInterferon-gammaMicroRNAsRNA-Binding Proteinsinflammationmuscle atrophyRNA-binding proteinskeletal muscleZfp697

Identifiers

PMID39141348
PMCPMC11348326

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.