Evidence map›Paper›PMID 39139035›Full record

ArticleJournal of the Royal Society, Interface2024

Dynamics and bifurcations in genetic circuits with fibration symmetries.

Ian Stewart, Saulo D S Reis, Hernán A Makse

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of the Royal Society, Interface, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ian StewartMathematics Institute, University of Warwick , Coventry CV4 7AL, UK.
Saulo D S ReisDepartamento de Física, Universidade Federal do Ceará , Fortaleza, Ceará, Brazil.
Hernán A MakseLevich Institute and Physics Department, City College of New York , New York, NY 10031, USA.ORCID 0000-0001-6474-1324

Funding

Application of the principle of symmetry to neural circuitry: From building blocks to neural synchronization in the connectomeR01EB028157 · NIBIB · CITY COLLEGE OF NEW YORK · PI MAKSE, HERNAN, ZIMMER, MANUEL · 2020 to 2020
$1.1M
National Institute of Biomedical Imaging and Bioengineering - NIH R01EB028157National Institute of Mental Health - NIH R01EB028157NIBIB NIH HHS R01 EB028157NIH BRAIN Initiative R01EB028157
6 · The paper itself

Abstract

Circuit building blocks of gene regulatory networks (GRN) have been identified through the fibration symmetries of the underlying biological graph. Here, we analyse analytically six of these circuits that occur as functional and synchronous building blocks in these networks. Of these, the lock-on, toggle switch, Smolen oscillator, feed-forward fibre and Fibonacci fibre circuits occur in living organisms, notably

Indexed as

Escherichia coliGene Regulatory NetworksModels, Geneticcomplex networkscomplex systemsdynamical systemsgene regulatory networkssystem biology

Identifiers

PMID39139035
PMCPMC11322742

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.