Evidence map›Paper›PMID 39138865›Full record

ArticlePlant communications2024

CRISPR-Cas9-mediated construction of a cotton CDPK mutant library for identification of insect-resistance genes.

Fuqiu Wang, Sijia Liang, Guanying Wang, Tianyu Hu, Chunyang Fu, Qiongqiong Wang, Zhongping Xu, Yibo Fan, Lianlian Che, Ling Min and 5 more

Abstract read
In one paragraph

Article in Plant communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Breeding jassid-resistant okra (Frontiers in plant science · 2026
    Review
  7. Review
  8. Article
  9. Review
  10. iMeta · 2024
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Fuqiu WangHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Sijia LiangAcademy of Industry Innovation and Development, Huanghuai University, Zhumadian, Henan 463000, China.
Guanying WangHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Tianyu HuHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Chunyang FuHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Qiongqiong WangHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Zhongping XuHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Yibo FanHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Lianlian CheHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Ling MinHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Bo LiXinjiang Key Laboratory of Crop Biotechnology, Institute of Nuclear and Biological Technology, Xinjiang Academy of Agricultural Sciences, Urumqi 830091 Xinjiang, China. Electronic address: libo@xaas.ac.cn.
Lu LongNational Key Laboratory of Cotton Bio-breeding and Integrated Utilization, School of Life Science, Henan University, Henan 475004, China. Electronic address: lulong1826@163.com.
Wei GaoNational Key Laboratory of Cotton Bio-breeding and Integrated Utilization, School of Life Science, Henan University, Henan 475004, China. Electronic address: gaowei021@163.com.
Xianlong ZhangHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
Shuangxia JinHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: jsx@mail.hzau.edu.cn.

Funding

Biological Breeding of Stress Tolerant and High Yield Cotton VarietiesKey Scientific and Technological Project of Henan ProvinceMajor Science and Technology Project of Xinjiang Uygur Autonomous RegionNational Natural Science Foundation of ChinaNational Natural Science Fund of China for Distinguished Young Scholars
6 · The paper itself

Abstract

Calcium-dependent protein kinases (CDPKs) act as key signal transduction enzymes in plants, especially in response to diverse stresses, including herbivory. In this study, a comprehensive analysis of the CDPK gene family in upland cotton revealed that GhCPKs are widely expressed in multiple cotton tissues and respond positively to various biotic and abiotic stresses. We developed a strategy for screening insect-resistance genes from a CRISPR-Cas9 mutant library of GhCPKs. The library was created using 246 single-guide RNAs targeting the GhCPK gene family to generate 518 independent T0 plants. The average target-gene coverage was 86.18%, the genome editing rate was 89.49%, and the editing heritability was 82%. An insect bioassay in the field led to identification of 14 GhCPK mutants that are resistant or susceptible to insects. The mutant that showed the clearest insect resistance, cpk33/74 (in which the homologous genes GhCPK33 and GhCPK74 were knocked out), was selected for further study. Oral secretions from Spodoptera litura induced a rapid influx of Ca

Indexed as

CRISPR-Cas SystemsGossypiumProtein KinasesAnimalsCalcium-Calmodulin-Dependent Protein KinasesGene EditingGene LibraryMutationPlant ProteinsSpodopteraCalcium-Calmodulin-Dependent Protein KinasesPlant ProteinsProtein KinasesCa(2+) influxCDPKscottonCRISPR–Cas9insect resistancemutant library

Identifiers

PMID39138865
PMCPMC11589327

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.