Evidence map›Paper›PMID 39136646›Full record

ArticleJournal of the American Chemical Society2024

Discovery of Thioether-Cyclized Macrocyclic Covalent Inhibitors by mRNA Display.

Tong Lan, Cheng Peng, Xiyuan Yao, Rachel Shu Ting Chan, Tongyao Wei, Anuchit Rupanya, Aleksandar Radakovic, Sijie Wang, Shiyu Chen, Scott Lovell and 3 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Enhanced screening via a pure DNA-encoded peptide library enabled by an Fmoc modification.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. An mRNA Display Approach for Covalent Targeting of aJournal of the American Chemical Society · 2025
    Article
  10. Review
  11. An mRNA Display Approach for Covalent Targeting of abioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Tong LanDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.ORCID 0000-0003-3923-5408
Cheng PengDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.
Xiyuan YaoDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.ORCID 0000-0002-2331-0023
Rachel Shu Ting ChanDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.
Tongyao WeiDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.
Anuchit RupanyaDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.
Aleksandar RadakovicDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.
Sijie WangDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305, United States.
Shiyu ChenDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305, United States.ORCID 0000-0001-6578-561X
Scott LovellDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305, United States.
Scott A SnyderDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.ORCID 0000-0003-3594-8769
Matthew BogyoDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305, United States.ORCID 0000-0003-3753-4412
Bryan C DickinsonDepartment of Chemistry, The University of Chicago, Chicago, Illinois 60637, United States.ORCID 0000-0002-9616-1911

Funding

Rapid selection approaches to understand and reprogram proteins and peptidesR35GM119840 · NIGMS · UNIVERSITY OF CHICAGO · PI Bryan Dickinson · 2016 to 2026
$4.8M
NIGMS NIH HHS R35 GM119840
6 · The paper itself

Abstract

Macrocyclic peptides are promising scaffolds for the covalent ligand discovery. However, platforms enabling the direct identification of covalent macrocyclic ligands in a high-throughput manner are limited. In this study, we present an mRNA display platform allowing selection of covalent macrocyclic inhibitors using 1,3-dibromoacetone-vinyl sulfone (DBA-VS). Testcase selections on TEV protease resulted in potent covalent inhibitors with diverse cyclic structures, among which cTEV6-2, a macrocyclic peptide with a unique C-terminal cyclization, emerged as the most potent covalent inhibitor of TEV protease described to-date. This study outlines the workflow for integrating chemical functionalization─installation of a covalent warhead─with mRNA display and showcases its application in targeted covalent ligand discovery.

Indexed as

RNA, MessengerCyclizationDrug DiscoveryMacrocyclic CompoundsMolecular StructurePeptides, CyclicProtease InhibitorsSulfidesSulfonesMacrocyclic CompoundsPeptides, CyclicProtease InhibitorsRNA, MessengerSulfidesSulfones

Identifiers

PMID39136646
PMCPMC11837906

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.