Evidence map›Paper›PMID 39135113›Full record

ArticlePlant methods2024

Advancing virus-induced gene silencing in sunflower: key factors of VIGS spreading and a novel simple protocol.

Majd Mardini, Mikhail Kazancev, Elina Ivoilova, Victoria Utkina, Anastasia Vlasova, Yakov Demurin, Alexander Soloviev, Ilya Kirov

Abstract read
In one paragraph

Article in Plant methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Genome-Wide Characterization of theInternational journal of molecular sciences · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Majd MardiniAll-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya Str. 42, 127550, Moscow, Russia.
Mikhail KazancevAll-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya Str. 42, 127550, Moscow, Russia.
Elina IvoilovaAll-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya Str. 42, 127550, Moscow, Russia.
Victoria UtkinaAll-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya Str. 42, 127550, Moscow, Russia.
Anastasia VlasovaAll-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya Str. 42, 127550, Moscow, Russia.
Yakov DemurinPustovoit All-Russia Research Institute of Oilseed Crops, Filatova St. 17, 350038, Krasnodar, Russia.
Alexander SolovievAll-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya Str. 42, 127550, Moscow, Russia.
Ilya KirovAll-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya Str. 42, 127550, Moscow, Russia. kirovez@gmail.com.

Funding

Russian Science Foundation 22-64-00076
6 · The paper itself

Abstract

Virus-Induced Gene Silencing (VIGS) is a versatile tool in plant science, yet its application to non-model species like sunflower demands extensive optimization due to transformation challenges. In this study, we aimed to elucidate the factors that significantly affect the efficiency of Agrobacterium-VIGS in sunflowers. After testing a number of approaches, we concluded that the seed vacuum technique followed by 6 h of co-cultivation produced the most efficient VIGS results. Genotype-dependency analysis revealed varying infection percentages (62-91%) and silencing symptom spreading in different sunflower genotypes. Additionally, we explored the mobility of tobacco rattle virus (TRV) and phenotypic silencing manifestation (photo-bleaching) across different tissues and regions of VIGS-infected sunflower plants. We showed the presence of TRV is not necessarily limited to tissues with observable silencing events. Finally, time-lapse observation demonstrated a more active spreading of the photo-bleached spots in young tissues compared to mature ones. This study not only offers a robust VIGS protocol for sunflowers but also provides valuable insights into genotype-dependent responses and the dynamic nature of silencing events, shedding light on TRV mobility across different plant tissues.

Indexed as

AgrobacteriumGenotype-dependencyHelianthus annuusPDSSeedsSimple protocolSunflowerTobacco rattle virusTRV mobilityVacuum infiltrationVIGS

Identifiers

PMID39135113
PMCPMC11318282

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.