Evidence map›Paper›PMID 39134572›Full record

ArticleScientific reports2024

The expression and clinical significance of ARHGAP25 in osteosarcoma based on bioinformatics analysis.

Xiaoqian Liu, Siyuan Zhang, Dong Wang, Kaili Lv, Yonggui Wang, Lei Peng

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiaoqian Liu *First Affiliated Hospital Trauma Center, Hainan Medical University, Haikou, 570100, China.
Siyuan Zhang *First Affiliated Hospital Trauma Center, Hainan Medical University, Haikou, 570100, China.
Dong Wang *First Affiliated Hospital Trauma Center, Hainan Medical University, Haikou, 570100, China.
Kaili LvSecond Affiliated Hospital Gynecology Department, Hainan Medical University, Haikou, 570100, China.
Yonggui WangFirst Affiliated Hospital Trauma Center, Hainan Medical University, Haikou, 570100, China. 18547804770@163.com.
Lei PengFirst Affiliated Hospital Trauma Center, Hainan Medical University, Haikou, 570100, China. xiaobo197518@163.com.

Funding

National Natural Science Foundation of China 82060347
6 · The paper itself

Abstract

ARHGAP25, a member of the ARHGAP family, encodes a negative regulator of Rho-GTPase that is important for actin remodeling, cell polarity, and cell migration. ARHGAP25 is down-regulated in a variety of solid tumors and promotes cancer cell growth, migration, and invasion. However, nothing is understood about ARHGAP25's biological function in osteosarcoma. This work used qPCR and WB to confirm the expression of ARHGAP25 in osteosarcoma following the initial analysis of its expression in pan-cancer. For GO and KEGG analysis, we have chosen 300 genes from the TARGET osteosarcoma data that had the strongest positive correlation with ARHGAP25, and we created nomogram and calibration charts. We simultaneously overexpressed ARHGAP25 in osteosarcoma cells to examine its impact on apoptosis and proliferation. By using MSP, we determined their methylation status in osteosarcoma cells and normal bone cells. We observed that ARHGAP25 was significantly downregulated in a range of malignancies, including osteosarcoma, and was associated with poor patient outcomes. The decrease of ARHGAP25 expression in osteosarcoma is related to DNA methylation. Overexpression of ARHGAP25 induced apoptosis and inhibited the proliferation of osteosarcoma cells in vitro. In addition, ARHGAP25 is also associated with immune-related pathways in osteosarcoma. These findings suggest that ARHGAP25 is a valuable prognostic biomarker in osteosarcoma patients.

Indexed as

ApoptosisBone NeoplasmsCell ProliferationComputational BiologyDNA MethylationGene Expression Regulation, NeoplasticGTPase-Activating ProteinsOsteosarcomaBiomarkers, TumorCell Line, TumorClinical RelevanceFemaleHumansMalePrognosisBiomarkers, TumorGTPase-Activating ProteinsARHGAP25BiomarkerMethylationOsteosarcoma

Identifiers

PMID39134572
PMCPMC11319463

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.