Evidence map›Paper›PMID 39133317›Full record

ArticlePediatric surgery international2024

NRP1 knockdown inhibits the invasion and migration of rhabdoid tumor of the kidney cells.

Bin Yamaoka, Eri Nagasaki-Maeoka, Shota Uekusa, Eri Muto-Fujita, Naoko Abe, Kyoko Fujiwara, Tsugumichi Koshinaga, Shuichiro Uehara

Abstract read
In one paragraph

Article in Pediatric surgery international, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bin Yamaoka *Department of Pediatric Surgery, Nihon University School of Medicine, 30-1 Oyaguchi-Kamicho, Itabashi, Tokyo, 173-0032, Japan.
Eri Nagasaki-Maeoka *Department of Pediatric Surgery, Nihon University School of Medicine, 30-1 Oyaguchi-Kamicho, Itabashi, Tokyo, 173-0032, Japan. nagasaki.eri@jichi.ac.jp.ORCID http://orcid.org/0000-0001-6413-3302
Shota UekusaDepartment of Pediatric Surgery, Nihon University School of Medicine, 30-1 Oyaguchi-Kamicho, Itabashi, Tokyo, 173-0032, Japan.
Eri Muto-FujitaDepartment of Pediatric Surgery, Nihon University School of Medicine, 30-1 Oyaguchi-Kamicho, Itabashi, Tokyo, 173-0032, Japan.
Naoko AbeDepartment of Pediatric Surgery, Nihon University School of Medicine, 30-1 Oyaguchi-Kamicho, Itabashi, Tokyo, 173-0032, Japan.
Kyoko FujiwaraDivision of General Medicine, Department of Medicine, Nihon University School of Medicine, Itabashi, Tokyo, 173-0032, Japan.
Tsugumichi KoshinagaDepartment of Pediatric Surgery, Nihon University School of Medicine, 30-1 Oyaguchi-Kamicho, Itabashi, Tokyo, 173-0032, Japan.
Shuichiro UeharaDepartment of Pediatric Surgery, Nihon University School of Medicine, 30-1 Oyaguchi-Kamicho, Itabashi, Tokyo, 173-0032, Japan. uehara.shuichiro@nihon-u.ac.jp.ORCID http://orcid.org/0000-0001-6542-3782

Funding

Japan Society for the Promotion of Science 22K16471
6 · The paper itself

Abstract

purposeThe aim of this study was to detect candidate oncogenes of rhabdoid tumor of the kidney (RTK) and evaluate their roles in RTK in vitro.

methodsAn integrated analysis of messenger RNA (mRNA) and microRNA (miRNA) sequencing was performed to determine the expression profile of exosome-derived miRNAs and mRNAs in human RTK-derived cell lines and a human embryonic renal cell line. A Gene Ontology enrichment analysis was performed to analyze the functional characteristics of differentially expressed mRNAs in RTK cells. Matrigel invasion and wound-healing assays were performed to evaluate the cell invasion and migration abilities.

resultsForty mRNAs were highly expressed in RTK cells targeted by exosomal miRNAs, the expression of which was lower in RTK cells than in the controls. These mRNAs were primarily related to cell adhesion. Of these mRNAs, we selected neuropilin 1 (NRP1) as a candidate oncogene because its upregulated expression is associated with a poor prognosis of several types of tumors. RTK cells in which NRP1 had been knocked down exhibited decreased invasive and migratory abilities.

conclusionOur study indicates that NRP1 acts as an oncogene by promoting the invasion and migration of RTK cells and that it could serve as a therapeutic target.

Indexed as

Cell MovementKidney NeoplasmsNeoplasm InvasivenessNeuropilin-1Rhabdoid TumorCell Line, TumorGene Expression Regulation, NeoplasticGene Knockdown TechniquesHumansMicroRNAsRNA, MessengerMicroRNAsNeuropilin-1NRP1 protein, humanRNA, MessengerIntegrated analysisNeuropilin 1OncogeneRhabdoid tumor of the kidney

Identifiers

PMID39133317
PMCPMC11319361

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.