Evidence map›Paper›PMID 39133101›Full record

ArticleMolecular and cellular biology2024

The Ribosome Assembly Factor LSG1 Interacts with Vesicle-Associated Membrane Protein-Associated Proteins (VAPs).

Putri Sutjita, Sharmishtha Musalgaonkar, Jeffrey Recchia-Rife, Lisa Huang, Blerta Xhemalce, Arlen W Johnson

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Putri SutjitaInterdisciplinary Life Sciences Graduate Program, The University of Texas at Austin, Austin, Texas, USA.
Sharmishtha MusalgaonkarDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0003-4177-9308
Jeffrey Recchia-RifeDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, USA.
Lisa HuangDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, USA.
Blerta XhemalceDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0002-0517-9607
Arlen W JohnsonDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0002-4742-085X

Funding

Eukaryotic Ribosome AssemblyR35GM127127 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Arlen W JOHNSON · 2018 to 2026
$5.6M
Elucidating mechanisms of microRNA pathway deregulation in human cellsR01GM127802 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI XHEMALCE, BLERTA · 2018 to 2022
$1.7M
NIGMS NIH HHS R01 GM127802NIGMS NIH HHS R35 GM127127
6 · The paper itself

Abstract

LSG1 is a conserved GTPase involved in ribosome assembly. It is required for the eviction of the nuclear export adapter NMD3 from the pre-60S subunit in the cytoplasm. In human cells, LSG1 has also been shown to interact with vesicle-associated membrane protein-associated proteins (VAPs) that are found primarily on the endoplasmic reticulum. VAPs interact with a large host of proteins which contain FFAT motifs (two phenylalanines (FF) in an acidic tract) and are involved in many cellular functions including membrane traffic and regulation of lipid transport. Here, we show that human LSG1 binds to VAPs via a noncanonical FFAT-like motif. Deletion of this motif specifically disrupts the localization of LSG1 to the ER, without perturbing LSG1-dependent recycling of NMD3

Indexed as

Endoplasmic ReticulumGTP PhosphohydrolasesAmino Acid MotifsHEK293 CellsHeLa CellsHumansMembrane ProteinsProtein BindingRibosomesVesicular Transport ProteinsGTP PhosphohydrolasesLSG1 protein, humanMembrane ProteinsVesicular Transport ProteinsLSG1Ribosome biogenesisVAPvesicle-associated membrane protein-associated protein

Identifiers

PMID39133101
PMCPMC11376406

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.