Evidence map›Paper›PMID 39132992›Full record

ArticleJournal of virology2024

Propagating and banking genetically diverse human sapovirus strains using a human duodenal cell line: investigating antigenic differences between strains.

Tomoichiro Oka, Tian-Cheng Li, Kenzo Yonemitsu, Yasushi Ami, Yuriko Suzaki, Michiyo Kataoka, Yen Hai Doan, Yuko Okemoto-Nakamura, Takayuki Kobayashi, Hiroyuki Saito and 5 more

Abstract read
In one paragraph

Article in Journal of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Establishment of a Novel Caco-2-Based Cell Culture System for Human Sapovirus Propagation.Genes to cells : devoted to molecular & cellular mechanisms · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Tomoichiro Oka *Department of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.ORCID 0000-0001-5224-2499
Tian-Cheng LiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.ORCID 0000-0002-6047-8482
Kenzo YonemitsuResearch Center for Biosafety, Laboratory Animal and Pathogen Bank, National Institute of Infectious Diseases, Tokyo, Japan.
Yasushi AmiResearch Center for Biosafety, Laboratory Animal and Pathogen Bank, National Institute of Infectious Diseases, Tokyo, Japan.
Yuriko SuzakiResearch Center for Biosafety, Laboratory Animal and Pathogen Bank, National Institute of Infectious Diseases, Tokyo, Japan.
Michiyo KataokaDepartment of Pathology, National Institute of Infectious Diseases, Tokyo, Japan.ORCID 0000-0002-2654-8803
Yen Hai DoanCenter for Emergency Preparedness and Response, National Institute of Infectious Diseases, Tokyo, Japan.
Yuko Okemoto-NakamuraDepartment of Biochemistry and Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan.
Takayuki KobayashiDivision of Virology, Fukuoka Institute of Health and Environmental Sciences, Fukuoka, Japan.ORCID 0009-0007-7558-4003
Hiroyuki SaitoDepartment of Microbiology, Akita Prefectural Research Center for Public Health and Environment, Akita, Japan.
Tetsuo MitaShimane Prefectural Meat Inspection Center, Shimane, Japan.
Eisuke TokuokaDepartment of Microbiology, Kumamoto Prefectural Institute of Public Health and Environmental Science, Kumamoto, Japan.
Shinichiro ShibataMicrobiology Department, Nagoya City Public Health Research Institute, Aichi, Japan.
Tetsuya YoshidaInfectious Diseases Division, Nagano Environmental Conservation Research Institute, Nagano, Japan.
Hirotaka Takagi *Research Center for Biosafety, Laboratory Animal and Pathogen Bank, National Institute of Infectious Diseases, Tokyo, Japan.ORCID 0000-0002-3489-3105

Funding

Japan Agency for Medical Research and Development (AMED) JP23fk0108683Japan Society for the Promotion of Science (JSPS) JP20K08320, JP24K13428Ministry of Health, Labour and Welfare (MHLW) JPMH22KA1001SHIONOGI INFECTIOUS DISEASE RESEARCH PROMOTION FOUNDATION
6 · The paper itself

Abstract

There are four genogroups and 18 genotypes of human sapoviruses (HuSaVs) responsible for acute gastroenteritis. To comprehend their antigenic and virological differences, it is crucial to obtain viral stocks of the different strains. Previously, we utilized the human duodenum-derived cell line HuTu80, and glycocholate, a conjugated bile acid, to replicate and propagate GI.1, GI.2, and GII.3 HuSaVs (H. Takagi et al., Proc Natl Acad Sci U S A 117:32078-32085, 2020, https://10.1073/pnas.2007310117). First, we investigated the impact of HuTu80 passage number on HuSaV propagation. Second, we demonstrated that taurocholate improved the initial replication success rate and viral RNA levels in fecal specimens relative to glycocholate. By propagating 15 HuSaV genotypes (GI.1-7, GII.1-5, -8, and GV.1-2) and accomplishing preparation of viral stocks containing 1.0 × 10 IMPORTANCE: The control of human sapovirus, which causes acute gastroenteritis in individuals of all ages, is challenging because of its association with outbreaks similar to those caused by human norovirus. The establishment of conditions for efficient viral propagation of various viral strains is essential for understanding the infection mechanism and identifying potential control methods. In this study, two critical factors for human sapovirus propagation in a conventional human duodenal cell line were identified, and 15 strains of different genotypes that differed at the genetic and antigenic levels were isolated and used to prepare virus stocks. The preparation of virus stocks has not been successful for noroviruses, which belong to the same family as sapoviruses. Securing virus stocks of multiple human sapovirus strains represents a significant advance toward establishing a reliable experimental system that does not depend on limited virus-positive fecal material.

Indexed as

Caliciviridae InfectionsDuodenumGenotypeSapovirusVirus ReplicationAnimalsAntigens, ViralBile Acids and SaltsCell LineFecesGastroenteritisGenetic VariationGuinea PigsHumansRabbitsRNA, ViralAntigens, ViralBile Acids and SaltsRNA, Viralantigen ELISAantigenicityconjugated bile acidsconventional cell linenorovirussapovirusscalable serial passagevirus isolation

Identifiers

PMID39132992
PMCPMC11406923

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.