Evidence map›Paper›PMID 39131617›Full record

ArticlePeerJ2024

Museomics allows comparative analyses of mitochondrial genomes in the family Gryllidae (Insecta, Orthoptera) and confirms its phylogenetic relationships.

Jiajia Dong, Yong Liu, Ming Kai Tan, Rodzay Abdul Wahab, Romain Nattier, Pascaline Chifflet-Belle, Tony Robillard

Abstract readComparative Study
In one paragraph

Article in PeerJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jiajia Dong *School of Life Sciences, Jiangsu Key Laboratory of Brain Disease and Bioinformation, Research Center for Biochemistry and Molecular Biology, Xuzhou Medical University, Xuzhou, China.
Yong Liu *School of Life Sciences, Jiangsu Key Laboratory of Brain Disease and Bioinformation, Research Center for Biochemistry and Molecular Biology, Xuzhou Medical University, Xuzhou, China.
Ming Kai TanInstitut de Systématique, Evolution et Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, SU, EPHE-SPL, UA, Paris, France.
Rodzay Abdul WahabInstitute for Biodiversity and Environmental Research, Universiti Brunei Darussalam, Jalan Universiti, Gadong, Brunei Darussalam.
Romain NattierInstitut de Systématique, Evolution et Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, SU, EPHE-SPL, UA, Paris, France.
Pascaline Chifflet-BelleInstitut de Systématique, Evolution et Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, SU, EPHE-SPL, UA, Paris, France.
Tony RobillardInstitut de Systématique, Evolution et Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, SU, EPHE-SPL, UA, Paris, France.

Funding

National Natural Science Foundation of ChinaNatural Science Foundation of Jiangsu ProvinceScientific Research Foundation for the Talents by the Xuzhou Medical University
6 · The paper itself

Abstract

Background: Next-generation sequencing technology can now be used to sequence historical specimens from natural history collections, an approach referred to as museomics. The museomics allows obtaining molecular data from old museum-preserved specimens, a resource of biomolecules largely underexploited despite the fact that these specimens are often unique samples of nomenclatural types that can be crucial for resolving scientific questions. Despite recent technical progress, cricket mitogenomes are still scarce in the databases, with only a handful of new ones generated each year from freshly collected material. Methods: In this study, we used the genome skimming method to sequence and assemble three new complete mitogenomes representing two tribes of the cricket subfamily Eneopterinae: two were obtained from old, historical type material of Results: Our study not only confirmed that the genome skimming method used by next generation sequencing allows us to efficiently obtain the whole mitogenome from dry-pinned historical specimens, but we also confirmed how promising it is for large-scale comparative studies of mitogenomes using resources from natural history collections. Used in a phylogenetic context the new mitogenomes attest that the mitogenomic data contain valuable information and also strongly support phylogenetic relationships at multiple time scales.

Indexed as

Genome, MitochondrialGryllidaeHigh-Throughput Nucleotide SequencingPhylogenyAnimalsMuseumsBiological collectionCricketEneopterinaeMitogenomeMolecular phylogenyNGSTaxonomy

Identifiers

PMID39131617
PMCPMC11317039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.