Evidence map›Paper›PMID 39131403›Full record

ArticleJournal of physics. Complexity2024

The ultrametric backbone is the union of all minimum spanning forests.

Jordan C Rozum, Luis M Rocha

Abstract read
In one paragraph

Article in Journal of physics. Complexity, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jordan C RozumDepartment of Systems Science and Industrial Engineering, Binghamton University (State University of New York), Binghamton, NY, United States of America.ORCID https://orcid.org/0000-0002-4356-9809
Luis M RochaDepartment of Systems Science and Industrial Engineering, Binghamton University (State University of New York), Binghamton, NY, United States of America.ORCID https://orcid.org/0000-0001-9402-887X

Funding

Evidence-based Drug-Interaction Discovery: In-Vivo, In-Vitro and ClinicalR01LM011945 · NLM · INDIANA UNIVERSITY INDIANAPOLIS · PI LI, LANG, ROCHA, LUIS M · 2014 to 2017
$1.8M
myAURA: Personalized Web Service for Epilepsy ManagementR01LM012832 · NLM · TRUSTEES OF INDIANA UNIVERSITY · PI BORNER, KATY, MILLER, WENDY RENEE · 2018 to 2021
$1.3M
NLM NIH HHS R01 LM011945
6 · The paper itself

Abstract

Minimum spanning trees and forests are powerful sparsification techniques that remove cycles from weighted graphs to minimize total edge weight while preserving node reachability, with applications in computer science, network science, and graph theory. Despite their utility and ubiquity, they have several limitations, including that they are only defined for undirected networks, they significantly alter dynamics on networks, and they do not generally preserve important network features such as shortest distances, shortest path distribution, and community structure. In contrast, distance backbones, which are subgraphs formed by all edges that obey a generalized triangle inequality, are well defined in directed and undirected graphs and preserve those and other important network features. The backbone of a graph is defined with respect to a specified path-length operator that aggregates weights along a path to define its length, thereby associating a cost to indirect connections. The backbone is the union of all shortest paths between each pair of nodes according to the specified operator. One such operator, the max function, computes the length of a path as the largest weight of the edges that compose it (a weakest link criterion). It is the only operator that yields an algebraic structure for computing shortest paths that is consistent with De Morgan's laws. Applying this operator yields the ultrametric backbone of a graph in that (semi-triangular) edges whose weights are larger than the length of an indirect path connecting the same nodes (i.e. those that break the generalized triangle inequality based on max as a path-length operator) are removed. We show that the ultrametric backbone is the union of minimum spanning forests in undirected graphs and provides a new generalization of minimum spanning trees to directed graphs that, unlike minimum equivalent graphs and minimum spanning arborescences, preserves all

Indexed as

complex networksdistance backbonedistance closuredistance graphsminimum spanning treesshortest pathssparsification

Identifiers

PMID39131403
PMCPMC11307140

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.