Evidence map›Paper›PMID 39131402›Full record

ArticlebioRxiv : the preprint server for biology2025

Mechanism of beta-arrestin 1 mediated Src activation via Src SH3 domain revealed by cryo-electron microscopy.

Natalia Pakharukova, Brittany N Thomas, Harsh Bansia, Linus Li, Dana K Bassford, Rinat R Abzalimov, Jihee Kim, Alem W Kahsai, Biswaranjan Pani, Kunhong Xiao and 6 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Natalia PakharukovaDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.ORCID 0000-0002-8363-6105
Brittany N ThomasDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.ORCID 0000-0001-8317-7538
Harsh BansiaDepartment of Molecular Pathobiology, College of Dentistry, New York University, New York, 10010, USA.ORCID 0000-0002-6738-8754
Linus LiDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.ORCID 0000-0002-8302-7860
Dana K BassfordDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.ORCID 0009-0005-8474-5046
Rinat R AbzalimovStructural Biology Initiative, CUNY Advanced Science Research Center; New York, NY 10031, USA.ORCID 0000-0003-2110-1532
Jihee KimDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.
Alem W KahsaiDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.ORCID 0000-0001-9272-4484
Biswaranjan PaniDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.ORCID 0000-0003-4811-4632
Kunhong XiaoCenter for Proteomics & Artificial Intelligence, Allegheny Health Network Cancer Institute, Pittsburgh, PA 15202, USA.
Roni OchakovskiDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.
Shibo LiuStructural Biology Initiative, CUNY Advanced Science Research Center; New York, NY 10031, USA.
Xingdong ZhangDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.
Seungkirl AhnDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.
Amedee des GeorgesDepartment of Molecular Pathobiology, College of Dentistry, New York University, New York, 10010, USA.ORCID 0000-0002-9704-3781
Robert J LefkowitzDepartment of Medicine, Duke University Medical Center; Durham, NC 27710, USA.ORCID 0000-0003-1472-7545

Funding

Molecular Regulation of Cardiovascular 7 TM ReceptorsR01HL016037 · NHLBI · DUKE UNIVERSITY · PI ROBERT J LEFKOWITZ · 1985 to 2026
$14.5M
Understanding membrane proteins’ allosteric modulation with cryo-EMR35GM133598 · NIGMS · NEW YORK UNIVERSITY · PI Amedee des Georges · 2019 to 2026
$3.4M
NHLBI NIH HHS R01 HL016037NIGMS NIH HHS R35 GM133598
6 · The paper itself

Abstract

Beta-arrestins (βarrs) are key regulators and transducers of G-protein coupled receptor signaling; however, little is known of how βarrs communicate with their downstream effectors. Here, we report the first structural insights into the fundamental mechanisms driving βarr-mediated signal transduction. Using cryo-electron microscopy, we elucidate how βarr1 recruits and activates the non-receptor tyrosine kinase Src, the first identified signaling partner of βarrs. βarr1 engages Src SH3 through two distinct sites, each employing a different recognition mechanism: a polyproline motif in the N-domain and a non-proline-based interaction in the central crest region. At both sites βarr1 interacts with the aromatic surface of SH3, disrupting the autoinhibited conformation of Src and directly triggering its allosteric activation. This structural evidence establishes βarr1 as an active regulatory protein rather than a passive scaffold and suggests a potentially general mechanism for βarr-mediated signaling across diverse effectors.

Identifiers

PMID39131402
PMCPMC11312540

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.