Evidence map›Paper›PMID 39131399›Full record

ArticlebioRxiv : the preprint server for biology2024

Structural transitions in kinesin minus-end directed microtubule motility.

Satoki Shibata, Matthew Y Wang, Tsuyoshi Imasaki, Hideki Shigematsu, Yuanyuan Wei, Chacko Jobichen, Hajime Hagio, J Sivaraman, Sharyn A Endow, Ryo Nitta

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Satoki ShibataDivision of Structural Medicine and Anatomy, Department of Physiology and Cell Biology, Kobe University Graduate School of Medicine, Kobe, 650-0017, Japan.ORCID 0009-0004-3070-4073
Matthew Y WangDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0001-8509-8083
Tsuyoshi ImasakiDivision of Structural Medicine and Anatomy, Department of Physiology and Cell Biology, Kobe University Graduate School of Medicine, Kobe, 650-0017, Japan.ORCID 0000-0001-5462-1820
Hideki ShigematsuStructural Biology Division, Japan Synchrotron Radiation Research Institute, SPring-8, Sayo, Hyogo, 679-5184, Japan.ORCID 0000-0003-3951-8651
Yuanyuan WeiNeuroscience & Behavioral Disorders Programme, Duke-NUS School of Medicine, SG 169857, USA.ORCID 0000-0002-9904-5801
Chacko JobichenDepartment of Biological Sciences, National University of Singapore, SG 117558, Singapore.ORCID 0000-0001-5927-1815
Hajime HagioDivision of Structural Medicine and Anatomy, Department of Physiology and Cell Biology, Kobe University Graduate School of Medicine, Kobe, 650-0017, Japan.ORCID 0009-0008-0560-490X
J SivaramanDepartment of Biological Sciences, National University of Singapore, SG 117558, Singapore.ORCID 0000-0001-9781-5326
Sharyn A EndowDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0002-0907-8889
Ryo NittaDivision of Structural Medicine and Anatomy, Department of Physiology and Cell Biology, Kobe University Graduate School of Medicine, Kobe, 650-0017, Japan.ORCID 0000-0002-6537-9272

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
Kinesin Force Production and Biomechanics of DivisionR21HD105034 · NICHD · DUKE UNIVERSITY · PI ENDOW, SHARYN A. · 2021 to 2022
$294k
NICHD NIH HHS R21 HD105034NIGMS NIH HHS P30 GM124165NIH HHS S10 OD021527
6 · The paper itself

Abstract

Kinesin motor proteins hydrolyze ATP to produce force for spindle assembly and vesicle transport, performing essential functions in cell division and motility, but the structural changes required for force generation are uncertain. We now report high-resolution structures showing new transitions in the kinesin mechanochemical cycle, including power stroke fluctuations upon ATP binding and a post-hydrolysis state with bound ADP + free phosphate. We find that rate-limiting ADP release occurs upon microtubule binding, accompanied by central β-sheet twisting, which triggers the power stroke - stalk rotation and neck mimic docking - upon ATP binding. Microtubule release occurs with β-strand-to-loop transitions, implying that β-strand refolding induces Pi release and the recovery stroke. The strained β-sheet during the power stroke and strand-to-loop transitions identify the β-sheet as the long-sought motor spring.

Indexed as

Cryo-electron microscopyCrystal structureForce productionKinesin motor proteinMechanical statesMechanochemical couplingMotor spring-like elementPower stroke fluctuationsReversed motility

Identifiers

PMID39131399
PMCPMC11312455

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.