Evidence map›Paper›PMID 39127970›Full record

ArticleCurrent microbiology2024

Rapid Revealing of Quorum Sensing (QS)-Regulated PLA, Biofilm and Lysine Targets of Lactiplantibacillus plantarum L3.

Yunmei Chai, Qingwen Ma, Jinze He, Guangqiang Wei, Aixiang Huang

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Article in Current microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yunmei ChaiDepartment of Food Science, College of Food Science and Technology, Yunnan Agricultural University, Kunming, 650201, Yunnan, China.
Qingwen MaYunnan Normal University, Kunming, 650092, Yunnan, China.
Jinze HeDepartment of Food Science, College of Food Science and Technology, Yunnan Agricultural University, Kunming, 650201, Yunnan, China.
Guangqiang WeiDepartment of Food Science, College of Food Science and Technology, Yunnan Agricultural University, Kunming, 650201, Yunnan, China.
Aixiang HuangDepartment of Food Science, College of Food Science and Technology, Yunnan Agricultural University, Kunming, 650201, Yunnan, China. aixianghuang@126.com.

Funding

National Natural Science Foundation of China No. 32260578Yunnan Province-City Integration Project 202302AN360002
6 · The paper itself

Abstract

Quorum sensing (QS) can regulate the production of multiple functional factors in bacteria, but the process of identifying its regulatory targets is very complex and labor-intensive. In this study, an efficient and rapid method to find QS targets through prediction was used. The genome of Lactiplantibacillus plantarum (L. plantarum) L3 was sequenced and characterized, and then linked the L. plantarum L3 genome to the STRING database for QS system regulatory target prediction. A total of 3,167,484 base pairs (bps) were examined from the genome of L. plantarum L3, and 30 QS-related genes were discovered (including luxS). The STRING database prediction indicated that the 30 QS-related genes are mainly involved in the regulation of nine metabolic pathways. Furthermore, metE, metK, aroB, cysE, and birA1 were predicted to be regulatory targets of the LuxS/AI-2 QS system, and these five targets were validated based on quantitative real-time PCR and content determination. Successful elucidation of the LuxS/AI-2 QS system's key targets and regulation mechanism in L. plantarum L3 demonstrated the effectiveness of the new approach for predicting QS targets and provides a scientific basis for future work on improving regulation of functional factor production.

Indexed as

Bacterial ProteinsBiofilmsGene Expression Regulation, BacterialLysineQuorum SensingCarbon-Sulfur LyasesGenome, BacterialLactiplantibacillus plantarumBacterial ProteinsCarbon-Sulfur LyasesLuxS protein, BacteriaLysine

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.