Evidence map›Paper›PMID 39126602›Full record

ArticleGenes & genomics2024

Contents of paeoniflorin and albiflorin in two Korean landraces of Paeonia lactiflora and characterization of paeoniflorin biosynthesis genes in peony.

Seungki Lee, Nam-Il Park, Yeri Park, Kweon Heo, Yongsoo Kwon, Eun Sil Kim, Youn Kyoung Son, Kyung Jin Lee, Seung Young Choi, Beom-Soon Choi and 2 more

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Article in Genes & genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Seungki Lee *Biological Resources Assessment Division, National Institute of Biological Resources, Incheon, 22689, Republic of Korea.
Nam-Il Park *Department of Plant Science, Gangneung-Wonju National University, Gangneung, 25457, Korea.
Yeri ParkDepartment of Plant Science, Gangneung-Wonju National University, Gangneung, 25457, Korea.
Kweon HeoDepartment of Plant Resources and Applied Science, Kangwon National University, Chuncheon, 24341, Korea.
Yongsoo KwonDepartment of Pharmacy, Kangwon National University, Chucheon, 24341, Korea.
Eun Sil KimBiological Resources Assessment Division, National Institute of Biological Resources, Incheon, 22689, Republic of Korea.
Youn Kyoung SonBiological Resources Assessment Division, National Institute of Biological Resources, Incheon, 22689, Republic of Korea.
Kyung Jin LeeBiological Resources Assessment Division, National Institute of Biological Resources, Incheon, 22689, Republic of Korea.
Seung Young ChoiNBIT Co., Ltd., Chuncheon, 24341, Korea.
Beom-Soon ChoiNBIT Co., Ltd., Chuncheon, 24341, Korea.
Nam-Soo KimDepartment of Smart Farm and Agricultural Industry, Kangwon National University, Chuncheon, 24341, Korea. kimnamsu@kangwon.ac.
Ik-Young ChoiDepartment of Smart Farm and Agricultural Industry, Kangwon National University, Chuncheon, 24341, Korea. choii@kangwon.ac.kr.ORCID http://orcid.org/0000-0003-4168-0471

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background and research purposePaeoniflorin and albiflorin are monoterpene glycosides that exhibit various medicinal properties in Paeonia species. This study explored the terpene biosynthesis pathway and analyzed the distribution of these compounds in different tissues of two Korean landraces of Paeonia lactiflora to gain insights into the biosynthesis of monoterpene glycosides in P. lactiflora and their potential applications. MATERIALS AND

methodsTwo Korean landraces, Hongcheon var. and Hwacheon var, of P. lactiflora were used for the analyses. Contents of the paeoniflorin and albiflorin were analyzed using HPLC. RNA was extracted, sequenced, and subjected to transcriptome analysis. Differential gene expression, KEGG, and GO analyses were performed. Paeoniflorin biosynthesis genes were isolated from the transcriptomes using the genes in Euphorbia maculata with the NBLAST program. Phylogenetic analysis of of 1-Deoxy-D-xylulose 5-phosphate synthase (DOXPS), geranyl pyrophosphate synthase (GPPS), and pinene synthase (PS) was carried out with ClustalW and MEGA v5.0. RESULTS AND DISCUSSION: Analysis of paeoniflorin and albiflorin content in different tissues of the two P. lactiflora landraces revealed significant variation. Transcriptome analysis yielded 36,602 unigenes, most of which were involved in metabolic processes. The DEG analysis revealed tissue-specific expression patterns with correlations between landraces. The isolation of biosynthetic genes identified 173 candidates. Phylogenetic analysis of the key enzymes in these pathways provides insights into their evolutionary relationships. The sequencing and analysis of DOXPS, GPPS, PS revealed distinct clades and subclades, highlighting their evolutionary divergence and functional conservation. Our findings highlight the roots as the primary sites of paeoniflorin and albiflorin accumulation in P. lactiflora, underscoring the importance of tissue-specific gene expression in their biosynthesis.

conclusionthis study advances our understanding of monoterpene glycoside production and distribution in Paeonia, thereby guiding further plant biochemistry investigations.

Indexed as

GlucosidesMonoterpenesPaeoniaBiosynthetic PathwaysBridged-Ring CompoundsGene Expression Regulation, PlantGlycosidesPhylogenyPlant ProteinsTranscriptomealbiflorinBridged-Ring CompoundsGlucosidesGlycosidesMonoterpenespeoniflorinPlant ProteinsAlbiflorinMEP pathwayMVA pathwayPaeonia lactifloraPaeoniflorinTranscriptome

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.