Evidence map›Paper›PMID 39126098›Full record

ArticleInternational journal of molecular sciences2024

Multi-Level Protocol for Mechanistic Reaction Studies Using Semi-Local Fitted Potential Energy Surfaces.

Tomislav Piskor, Peter Pinski, Thilo Mast, Vladimir Rybkin

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Tomislav PiskorHQS Quantum Simulations GmbH, Rintheimer Straße 23, 76131 Karlsruhe, Germany.
Peter PinskiHQS Quantum Simulations GmbH, Rintheimer Straße 23, 76131 Karlsruhe, Germany.ORCID 0000-0003-2874-6843
Thilo MastHQS Quantum Simulations GmbH, Rintheimer Straße 23, 76131 Karlsruhe, Germany.
Vladimir RybkinHQS Quantum Simulations GmbH, Rintheimer Straße 23, 76131 Karlsruhe, Germany.ORCID 0000-0001-5136-6035

Funding

German Federal Ministry of Economic Affairs 01MQ22003AGerman Federal Ministry of Economic Affairs and Climate Action 01MK20005H
6 · The paper itself

Abstract

In this work, we propose a multi-level protocol for routine theoretical studies of chemical reaction mechanisms. The initial reaction paths of our investigated systems are sampled using the Nudged Elastic Band (NEB) method driven by a cheap electronic structure method. Forces recalculated at the more accurate electronic structure theory for a set of points on the path are fitted with a machine learning technique (in our case symmetric gradient domain machine learning or sGDML) to produce a semi-local reactive potential energy surface (PES), embracing reactants, products and transition state (TS) regions. This approach has been successfully applied to a unimolecular (Bergman cyclization of enediyne) and a bimolecular (S

Indexed as

ThermodynamicsCyclizationMachine LearningModels, ChemicalQuantum Theorypotential energy surfacereaction mechanismtransition state

Identifiers

PMID39126098
PMCPMC11312657

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.