Evidence map›Paper›PMID 39123271›Full record

ArticleBMC medical genomics2024

Genotype-phenotype spectrum and correlation of PHARC Syndrome due to pathogenic ABHD12 variants.

Xicui Long, Wenyu Xiong, Xuegang Wang, Jia Geng, Mingjun Zhong, Yu Huang, Man Liu, Fengxiao Bu, Jing Cheng, Yu Lu and 1 more

Abstract read
In one paragraph

Article in BMC medical genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Association ofInternational journal of molecular sciences · 2026
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xicui LongDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Wenyu XiongDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Xuegang WangDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Jia GengDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Mingjun ZhongDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Yu HuangDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Man LiuDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Fengxiao BuDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Jing ChengDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China.
Yu LuDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China. samuelluyu@163.com.
Huijun YuanDepartment of Oto-Rhino-Laryngology, West China Hospital of Sichuan University, Chengdu, 610000, China. yuanhj301@163.com.

Funding

1.3.5 Project for Disciplines of Excellence, West China Hospital, Sichuan University ZYJC20002National Key R&D Program of China 2021YFC10053101
6 · The paper itself

Abstract

backgroundA comprehensive understanding of the genetic basis of rare diseases and their regulatory mechanisms is essential for human molecular genetics. However, the genetic mutant spectrum of pathogenic genes within the Chinese population remains underrepresented. Here, we reported previously unreported functional ABHD12 variants in two Chinese families and explored the correlation between genetic polymorphisms and phenotypes linked to PHARC syndrome.

methodsParticipants with biallelic pathogenic ABHD12 variants were recruited from the Chinese Deafness Genetics Cohort. These participants underwent whole-genome sequencing. Subsequently, a comprehensive literature review was conducted.

resultsTwo Han Chinese families were identified, one with a compound heterozygous variant and the other with a novel homozygous variant in ABHD12. Among 65 PHARC patients, including 62 from the literature and 3 from this study, approximately 90% (57 out of 63) exhibited hearing loss, 82% (50 out of 61) had cataracts, 82% (46 out of 56) presented with retinitis pigmentosa, 79% (42 out of 53) experienced polyneuropathy, and 63% (36 out of 57) displayed ataxia. Seventeen different patterns were observed in the five main phenotypes of PHARC syndrome. A total of 33 pathogenic variants were identified in the ABHD12. Compared with other genotypes, individuals with biallelic truncating variants showed a higher incidence of polyneuropathy (p = 0.006), but no statistically significant differences were observed in the incidence of hearing loss, ataxia, retinitis pigmentosa and cataracts.

conclusionsThe diagnosis of PHARC syndrome is challenging because of its genetic heterogeneity. Therefore, exploring novel variants and establishing genotype-phenotype correlations can significantly enhance gene diagnosis and genetic counseling for this complex disease.

Indexed as

AtaxiaCataractGenetic Association StudiesMonoacylglycerol LipasesPedigreePhenotypePolyneuropathiesRetinitis PigmentosaAdolescentAdultChildFemaleGenotypeHumansMaleMutationABHD12 protein, humanMonoacylglycerol LipasesABHD12Cochlear implantGenotype-phenotype associationsPHARC syndrome

Identifiers

PMID39123271
PMCPMC11312174

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