Evidence map›Paper›PMID 39122761›Full record

ArticleScientific reports2024

A study on factors influencing delayed sputum conversion in newly diagnosed pulmonary tuberculosis based on bacteriology and genomics.

Mengdi Pang, Xiaowei Dai, Nenhan Wang, Junli Yi, Shanhua Sun, Honghao Miao, Jie Zhang, Hongtai Zhang, Jie Li, Beichuan Ding and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Mengdi Pang *School of Public Health, Capital Medical University, Beijing, China.
Xiaowei Dai *Beijing Center for Disease Prevention and Control, Beijing, 100035, China.
Nenhan WangBeijing Center for Disease Prevention and Control, Beijing, 100035, China.
Junli YiBeijing Center for Disease Prevention and Control, Beijing, 100035, China.
Shanhua SunBeijing Center for Disease Prevention and Control, Beijing, 100035, China.
Honghao MiaoSchool of Public Health, Capital Medical University, Beijing, China.
Jie ZhangBeijing Center for Disease Prevention and Control, Beijing, 100035, China.
Hongtai ZhangBeijing Center for Disease Prevention and Control, Beijing, 100035, China.
Jie LiBeijing Center for Disease Prevention and Control, Beijing, 100035, China.
Beichuan DingBeijing Center for Disease Prevention and Control, Beijing, 100035, China.
Xinyu YangBeijing Center for Disease Prevention and Control, Beijing, 100035, China. 6666yxy@sina.com.
Chuanyou LiSchool of Public Health, Capital Medical University, Beijing, China. lichuanyou@ccmu.edu.cn.

Funding

Capital's Funds for Health Improvement and Research 2022-1G-3012the Scientific Research Training program of Beijing Center for Disease Control and Prevention 2023-KYJH-05
6 · The paper itself

Abstract

Conversion of sputum from positive to negative is one of the indicators to evaluate the efficacy of anti-tuberculosis treatment (ATT). We investigate the factors associated with delayed sputum conversion after 2 or 5 months of ATT from the perspectives of bacteriology and genomics. A retrospective study of sputum conversion in sputum positive 1782 pulmonary tuberculosis (PTB) was conducted from 2021 to 2022 in Beijing, China. We also designed a case-matched study including 24 pairs of delayed-sputum-conversion patients (DSCPs) and timely-sputum-conversion patients (TSCPs), and collect clinical isolates from DSCPs before and after ATT and initial isolates of TSCPs who successfully achieved sputum conversion to negative after 2 months of ATT. A total of 75 strains were conducted drug sensitivity testing (DST) of 13 anti-TB drugs and whole-genome sequencing (WGS) to analyze the risk factors of delayed conversion and the dynamics changes of drug resistance and genomics of Mycobacterium tuberculosis (MTB) during ATT. We found TSCPs have better treatment outcomes and whose initial isolates show lower levels of drug resistance. Clinical isolates of DSCPs showed dynamically changing of resistance phenotypes and intra-host heterogeneity. Single nucleotide polymorphism (SNP) profiles showed large differences between groups. The study provided insight into the bacteriological and genomic variation of delayed sputum conversion. It would be helpful for early indication of sputum conversion and guidance on ATT.

Indexed as

Antitubercular AgentsGenomicsMycobacterium tuberculosisSputumTuberculosis, PulmonaryAdultDrug Resistance, BacterialFemaleHumansMaleMicrobial Sensitivity TestsMiddle AgedPolymorphism, Single NucleotideRetrospective StudiesTreatment OutcomeWhole Genome SequencingAntitubercular AgentsAnti-tuberculosis treatmentDelayed sputum conversionDrug-resistanceMycobacterium tuberculosisWhole genome sequencing

Identifiers

PMID39122761
PMCPMC11315884

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.