Evidence map›Paper›PMID 39121805›Full record

ReviewCurrent opinion in cell biology2024

Reorganizing chromatin by cellular deformation.

Sarthak Gupta, Maxx Swoger, Renita Saldanha, J M Schwarz, Alison E Patteson

Abstract readReview
In one paragraph

Review in Current opinion in cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sarthak GuptaPhysics Department and BioInspired Institute, Syracuse University, Syracuse, NY, USA; Center for Theoretical Biological Physics, Rice University, Houston, TX, USA.
Maxx SwogerPhysics Department and BioInspired Institute, Syracuse University, Syracuse, NY, USA.
Renita SaldanhaPhysics Department and BioInspired Institute, Syracuse University, Syracuse, NY, USA.
J M SchwarzPhysics Department and BioInspired Institute, Syracuse University, Syracuse, NY, USA; Indian Creek Farm, Ithaca, NY, USA.
Alison E PattesonPhysics Department and BioInspired Institute, Syracuse University, Syracuse, NY, USA. Electronic address: aepattes@syr.edu.

Funding

Role of vimentin in mammalian cell motilityR35GM142963 · NIGMS · SYRACUSE UNIVERSITY · PI PATTESON, ALISON ELISE · 2021 to 2025
$2.1M
NIGMS NIH HHS R35 GM142963
6 · The paper itself

Abstract

Biologists have the capability to edit a genome at the nanometer scale and then observe whether or not the edit affects the structure of a developing organ or organism at the centimeter scale. Our understanding of the underlying mechanisms driving this emergent phenomenon from a multiscale perspective remains incomplete. This review focuses predominantly on recent experimental developments in uncovering the mechanical interplay between the chromatin and cell scale since mechanics plays a major role in determining nuclear, cellular, and tissue structure. Here, we discuss the generation and transmission of forces through the cytoskeleton, affecting chromatin diffusivity and organization. Decoding such pieces of these multiscale connections lays the groundwork for solving the genotype-to-phenotype puzzle in biology.

Indexed as

ChromatinCytoskeletonAnimalsChromatin Assembly and DisassemblyHumansChromatin

Identifiers

PMID39121805
PMCPMC11392642

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.