Evidence map›Paper›PMID 39120039›Full record

ArticleThe Journal of chemical physics2024

Featurizing Koopman mode decomposition for robust forecasting.

David Aristoff, Jeremy Copperman, Nathan Mankovich, Alexander Davies

Abstract read
In one paragraph

Article in The Journal of chemical physics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

David AristoffColorado State University, Fort Collins, Colorado 80523, USA.ORCID 0000-0002-0347-0812
Jeremy CoppermanOregon Health and Science University, Cancer Early Detection Advanced Research Center, Knight Cancer Institute, Portland, Oregon 97201, USA.ORCID 0000-0002-5202-0690
Nathan MankovichUniversity of Valencia, València 46010, Spain.ORCID 0000-0002-5273-6349
Alexander DaviesOregon Health and Science University, Cancer Early Detection Advanced Research Center, Knight Cancer Institute, Portland, Oregon 97201, USA.ORCID 0000-0002-1917-8816

Funding

Targeting ERK-AKT-mediated single-cell drug response heterogeneity in metastatic osteosarcomaK01OD031811 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI DAVIES, ALEXANDER E · 2021 to 2025
$599k
NIH HHS K01 OD031811
6 · The paper itself

Abstract

This article introduces an advanced Koopman mode decomposition (KMD) technique-coined Featurized Koopman Mode Decomposition (FKMD)-that uses delay embedding and a learned Mahalanobis distance to enhance analysis and prediction of high-dimensional dynamical systems. The delay embedding expands the observation space to better capture underlying manifold structures, while the Mahalanobis distance adjusts observations based on the system's dynamics. This aids in featurizing KMD in cases where good features are not a priori known. We show that FKMD improves predictions for a high-dimensional linear oscillator, a high-dimensional Lorenz attractor that is partially observed, and a cell signaling problem from cancer research.

Identifiers

PMID39120039
PMCPMC11316605

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.