Evidence map›Paper›PMID 39119916›Full record

ArticleGenes, brain, and behavior2024

Genome-wide association study of delay discounting in Heterogeneous Stock rats.

Montana Kay Lara, Apurva S Chitre, Denghui Chen, Benjamin B Johnson, Khai-Minh Nguyen, Katarina A Cohen, Sakina A Muckadam, Bonnie Lin, Shae Ziegler, Angela Beeson and 5 more

Abstract read
In one paragraph

Article in Genes, brain, and behavior, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Montana Kay LaraDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Apurva S ChitreDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Denghui ChenDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Benjamin B JohnsonDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Khai-Minh NguyenDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Katarina A CohenDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Sakina A MuckadamDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Bonnie LinDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Shae ZieglerDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Angela BeesonDepartment of Internal Medicine, Wake Forest School of Medicine, Wake Forest University, Winston-Salem, North Carolina, USA.
Thiago M SanchesDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Leah C Solberg WoodsDepartment of Internal Medicine, Wake Forest School of Medicine, Wake Forest University, Winston-Salem, North Carolina, USA.ORCID 0000-0002-7943-798X
Oksana PolesskayaDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Abraham A PalmerDepartment of Psychiatry, University of California San Diego, La Jolla, California, USA.
Suzanne H MitchellDepartment of Behavioral Neuroscience, Psychiatry, the Oregon Institute of Occupational Health Sciences, Oregon Health & Science University, Portland, Oregon, USA.

Funding

Translational measures of risk for excessive alcohol consumptionP60AA010760 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI TAMARA J. PHILLIPS · 2006 to 2026
$34.5M
Sequencing CoreP50DA037844 · NIDA · UNIVERSITY OF CHICAGO · PI PALMER, ABRAHAM A · 2014 to 2023
$27.4M
The role of structural variants and tandem repeats in substance abuse-related behavioral traitsU01DA051234 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GYMREK, MELISSA, PALMER, ABRAHAM A · 2021 to 2025
$3.5M
Identification of genetic features of delay discounting using a heterogeneous stock rat modelU01DA046077 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI MITCHELL, SUZANNE H · 2018 to 2022
$2.5M
DHHS P50DA037844DHHS P60AA010760DHHS U01DA046077DHHS U01DA051234NIAAA NIH HHS P60 AA010760NIDA NIH HHS P50 DA037844NIDA NIH HHS U01 DA046077NIDA NIH HHS U01 DA051234
6 · The paper itself

Abstract

Delay discounting refers to the behavioral tendency to devalue rewards as a function of their delay in receipt. Heightened delay discounting has been associated with substance use disorders and multiple co-occurring psychopathologies. Human and animal genetic studies have established that delay discounting is heritable, but only a few associated genes have been identified. We aimed to identify novel genetic loci associated with delay discounting through a genome-wide association study (GWAS) using Heterogeneous Stock (HS) rats, a genetically diverse outbred population derived from eight inbred founder strains. We assessed delay discounting in 650 male and female HS rats using an adjusting amount procedure in which rats chose between smaller immediate sucrose rewards or a larger reward at various delays. Preference switch points were calculated and both exponential and hyperbolic functions were fitted to these indifference points. Area under the curve (AUC) and the discounting parameter k of both functions were used as delay discounting measures. GWAS for AUC, exponential k, and one indifference point identified significant loci on chromosomes 20 and 14. The gene Slc35f1, which encodes a member of the solute carrier family, was the sole gene within the chromosome 20 locus. That locus also contained an eQTL for Slc35f1, suggesting that heritable differences in the expression might be responsible for the association with behavior. Adgrl3, which encodes a latrophilin subfamily G-protein coupled receptor, was the sole gene within the chromosome 14 locus. These findings implicate novel genes in delay discounting and highlight the need for further exploration.

Indexed as

Delay DiscountingGenome-Wide Association StudyAnimalsFemaleMaleQuantitative Trait LociRatsRewardadjusting amountdelay discountingGWASHeterogeneous Stock rats

Identifiers

PMID39119916
PMCPMC11310854

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.