Evidence map›Paper›PMID 39119822›Full record

ArticleMicrobiologyOpen2024

Differential association of key bacterial groups with diatoms and Phaeocystis spp. during spring blooms in the Southern Ocean.

Nyree J West, Marine Landa, Ingrid Obernosterer

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nyree J WestCNRS FR3724, Observatoire Océanologique de Banyuls (OOB), Sorbonne Université, Banyuls sur mer, France.ORCID 0000-0003-3763-6996
Marine LandaLaboratoire d'Océanographie Microbienne, LOMIC, CNRS, Sorbonne Université, Banyuls sur mer, France.
Ingrid ObernostererLaboratoire d'Océanographie Microbienne, LOMIC, CNRS, Sorbonne Université, Banyuls sur mer, France.ORCID 0000-0002-2530-8111

Funding

Agence Nationale de la Recherche 10-BLAN-0614Centre National de la Recherche Scientifique LEFE-CYBERInstitut Polaire Français Paul Emile Victor
6 · The paper itself

Abstract

Interactions between phytoplankton and heterotrophic bacteria significantly influence the cycling of organic carbon in the ocean, with many of these interactions occurring at the micrometer scale. We explored potential associations between specific phytoplankton and bacteria in two size fractions, 0.8-3 µm and larger than 3 µm, at three naturally iron-fertilized stations and one high nutrient low chlorophyll station in the Southern Ocean. The composition of phytoplankton and bacterial communities was determined by sequencing the rbcL gene and 16S rRNA gene from DNA and RNA extracts, which represent presence and potential activity, respectively. Diatoms, particularly Thalassiosira, contributed significantly to the DNA sequences in the larger size fractions, while haptophytes were dominant in the smaller size fraction. Correlation analysis between the most abundant phytoplankton and bacterial operational taxonomic units revealed strong correlations between Phaeocystis and picoeukaryotes with SAR11, SAR116, Magnetospira, and Planktomarina. In contrast, most Thalassiosira operational taxonomic units showed the highest correlations with Polaribacter, Sulfitobacteria, Erythrobacter, and Sphingobium, while Fragilariopsis, Haslea, and Thalassionema were correlated with OM60, Fluviicola, and Ulvibacter. Our in-situ observations suggest distinct associations between phytoplankton and bacterial taxa, which could play crucial roles in nutrient cycling in the Southern Ocean.

Indexed as

BacteriaDiatomsOceans and SeasRNA, Ribosomal, 16SSeawaterDNA, BacterialHaptophytaPhylogenyPhytoplanktonSeasonsSequence Analysis, DNADNA, BacterialRNA, Ribosomal, 16Salgaecell‐microbe interactionsmolecular microbial ecologyOcean microbiology

Identifiers

PMID39119822
PMCPMC11310772

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.