Evidence map›Paper›PMID 39119682›Full record

ArticlePlant & cell physiology2024

Phytochrome C and Low Temperature Promote the Protein Accumulation and Red-Light Signaling of Phytochrome D.

Csaba Péter, Éva Ádám, Cornelia Klose, Gábor Grézal, Anita Hajdu, Gábor Steinbach, László Kozma-Bognár, Dániel Silhavy, Ferenc Nagy, András Viczián

Abstract read
In one paragraph

Article in Plant & cell physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Csaba PéterLaboratory of Photo and Chronobiology, Institute of Plant Biology, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
Éva ÁdámLaboratory of Photo and Chronobiology, Institute of Plant Biology, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
Cornelia KloseInstitute of Biology II, University of Freiburg, Schänzlestr. 1, Freiburg 79104, Germany.
Gábor GrézalSynthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
Anita HajduLaboratory of Photo and Chronobiology, Institute of Plant Biology, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
Gábor SteinbachCellular Imaging Laboratory, Biological Research Center, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
László Kozma-BognárLaboratory of Photo and Chronobiology, Institute of Plant Biology, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
Dániel SilhavyLaboratory of Photo and Chronobiology, Institute of Plant Biology, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
Ferenc NagyLaboratory of Photo and Chronobiology, Institute of Plant Biology, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.
András VicziánLaboratory of Photo and Chronobiology, Institute of Plant Biology, Biological Research Centre, Hungarian Research Network (HUN-REN), Temesvari krt. 62, Szeged H-6726, Hungary.ORCID 0000-0003-2055-3430

Funding

Hungarian Scientific Research Fund K-128740 K-132633 K-138022 K-139349 PD-138963
6 · The paper itself

Abstract

Light affects almost every aspect of plant development. It is perceived by photoreceptors, among which phytochromes (PHY) are responsible for monitoring the red and far-red spectrum. Arabidopsis thaliana possesses five phytochrome genes (phyA-phyE). Whereas functions of phyA and phyB are extensively studied, our knowledge of other phytochromes is still rudimentary. To analyze phyD function, we expressed it at high levels in different phytochrome-deficient genetic backgrounds. Overexpressed phyD-YFP can govern effective light signaling but only at low temperatures and in cooperation with functional phyC. Under these conditions, phyD-YFP accumulates to high levels, and opposite to phyB, this pool is stable in light. By comparing the photoconvertible phyD-YFP and phyB levels and their signaling in continuous and pulsed irradiation, we showed that phyD-YFP is a less efficient photoreceptor than phyB. This conclusion is supported by the facts that only a part of the phyD-YFP pool is photoconvertible and that thermal reversion of phyD-YFP is faster than that of phyB. Our data suggest that the temperature-dependent function of phyD is based on the amount of phyD protein and not on its Pfr stability, as described for phyB. We also found that phyD-YFP and phyB-GFP are associated with strongly overlapping genomic locations and are able to mediate similar changes in gene expression; however, the efficiency of phyD-YFP is lower. Based on these data, we propose that under certain conditions, synergistic interaction of phyD and phyC can substitute phyB function in seedlings and in adult plants and thus increases the ability of plants to respond more flexibly to environmental changes.

Indexed as

ArabidopsisArabidopsis ProteinsLightPhytochromeCold TemperatureGene Expression Regulation, PlantPhytochrome BPlants, Genetically ModifiedSignal TransductionArabidopsis ProteinsPHYB protein, ArabidopsisPhytochromePhytochrome BArabidopsisPhotomorphogenesisphyD and phyC interactionPhytochromePhytochrome DThermal reversion

Identifiers

PMID39119682
PMCPMC11558544

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.