Evidence map›Paper›PMID 39119257›Full record

ArticleMicrobial cell (Graz, Austria)2024

Direct detection of stringent alarmones (pp)pGpp using malachite green.

Muriel Schicketanz, Magdalena Petrová, Dominik Rejman, Margherita Sosio, Stefano Donadio, Yong Everett Zhang

Abstract read
In one paragraph

Article in Microbial cell (Graz, Austria), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Changes in Muscle Quality and Gut Microbiota of Whiteleg Shrimp (Animals : an open access journal from MDPI · 2025
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Muriel SchicketanzDepartment of Biology, University of Copenhagen Copenhagen, DK-2200 Denmark.
Magdalena PetrováInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences v.v.i Prague Czech Republic.
Dominik RejmanInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences v.v.i Prague Czech Republic.
Margherita SosioNAICONS Srl Milan, 20139 Italy.
Stefano DonadioNAICONS Srl Milan, 20139 Italy.
Yong Everett ZhangDepartment of Biology, University of Copenhagen Copenhagen, DK-2200 Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The alarmone (p)ppGpp serves as the signalling molecule for the bacterial universal stringent response and plays a crucial role in bacterial virulence, persistence, and stress adaptation. Consequently, there is a significant focus on developing new drugs that target and modulate the levels of (p)ppGpp as a potential strategy for controlling bacterial infections. However, despite the availability of various methods for detecting (p)ppGpp, a simple and straightforward detection method is needed. In this study, we demonstrated that malachite green, a well-established compound used for phosphate detection, can directly detect (p)ppGpp and its analogues esp., pGpp. By utilizing malachite green, we identified three new inhibitors of the hydrolase activity of SpoT, one of the two RelA-SpoT homolog (RSH) proteins responsible for making and hydrolyzing (p)ppGpp in

Indexed as

malachite greenpGppppGpppppGppSpoTthermorubin

Identifiers

PMID39119257
PMCPMC11307201

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.