Evidence map›Paper›PMID 39118111›Full record

ArticleCell communication and signaling : CCS2024

In-silico predicted mouse melanopsins with blue spectral shifts deliver efficient subcellular signaling.

Dhanushan Wijayaratna, Filippo Sacchetta, Laura Pedraza-González, Francesca Fanelli, Tomohiro Sugihara, Mitsumasa Koyanagi, Senuri Piyawardana, Kiran Ghotra, Waruna Thotamune, Akihisa Terakita and 2 more

Abstract read
In one paragraph

Article in Cell communication and signaling : CCS, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Spectral Tuning in Mammalian Melanopsins.Molecular biology and evolution · 2025
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dhanushan Wijayaratna *Department of Chemistry, Saint Louis University, Saint Louis, MO, 63103, USA.
Filippo Sacchetta *Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena, Italy.
Laura Pedraza-GonzálezDepartment of Chemistry and Industrial Chemistry, University of Pisa, Pisa, Italy.
Francesca FanelliDepartment of Life Sciences, Dulbecco Telethon Institute, University of Modena and Reggio Emilia, Modena, I-41125, Italy.
Tomohiro SugiharaDepartment of Biology, Osaka Metropolitan University, O 3-3-138 Sugimoto, Sumiyoshi-Ku, Osaka, 558-8585, Japan.
Mitsumasa KoyanagiDepartment of Biology, Osaka Metropolitan University, O 3-3-138 Sugimoto, Sumiyoshi-Ku, Osaka, 558-8585, Japan.
Senuri PiyawardanaDepartment of Chemistry, Saint Louis University, Saint Louis, MO, 63103, USA.
Kiran GhotraDepartment of Biology, Siena Heights University, Adrian, MI, 49221, USA.
Waruna ThotamuneDepartment of Chemistry, Saint Louis University, Saint Louis, MO, 63103, USA.
Akihisa TerakitaDepartment of Biology, Osaka Metropolitan University, O 3-3-138 Sugimoto, Sumiyoshi-Ku, Osaka, 558-8585, Japan.
Massimo OlivucciDepartment of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena, Italy. olivucci@unisi.it.
Ajith KarunarathneDepartment of Chemistry, Saint Louis University, Saint Louis, MO, 63103, USA. wkarunarathne@slu.edu.

Funding

Optical control of endogenous G protein Coupled Receptor and G Protein Signaling.R01GM140191 · NIGMS · UNIVERSITY OF TOLEDO · PI KARUNARATHNE, WELIVITIYA KANKANAMLAGE AJITH · 2021 to 2023
$1.0M
National Center for Gene Therapy and Drugs based on RNA Technology CN00000041 CN3 RNANIGMS NIH HHS R01 GM140191NIH-NIGMS 1R01GM140191-01NSF CHE-SDM A 2102619
6 · The paper itself

Abstract

Melanopsin is a photopigment belonging to the G Protein-Coupled Receptor (GPCR) family expressed in a subset of intrinsically photosensitive retinal ganglion cells (ipRGCs) and responsible for a variety of processes. The bistability and, thus, the possibility to function under low retinal availability would make melanopsin a powerful optogenetic tool. Here, we aim to utilize mouse melanopsin to trigger macrophage migration by its subcellular optical activation with localized blue light, while simultaneously imaging the migration with red light. To reduce melanopsin's red light sensitivity, we employ a combination of in silico structure prediction and automated quantum mechanics/molecular mechanics modeling to predict minimally invasive mutations to shift its absorption spectrum towards the shorter wavelength region of the visible spectrum without compromising the signaling efficiency. The results demonstrate that it is possible to achieve melanopsin mutants that resist red light-induced activation but are activated by blue light and display properties indicating preserved bistability. Using the A333T mutant, we show that the blue light-induced subcellular melanopsin activation triggers localized PIP3 generation and macrophage migration, which we imaged using red light, demonstrating the optogenetic utility of minimally engineered melanopsins.

Indexed as

Rod OpsinsSignal TransductionAnimalsCell MovementComputer SimulationLightMacrophagesMelanopsinMiceMutationOptogeneticsMelanopsinRod OpsinsComputational modelingGPCRMelanopsinOptogeneticsQM/MM

Identifiers

PMID39118111
PMCPMC11312219

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.