Evidence map›Paper›PMID 39117748›Full record

ArticleArchives of virology2024

A time series transcriptome profiling of host cell responses to Newcastle disease virus infection.

B Nagaraj Nayak, Preethi Palanisamy, Sangita Venkataraman, Madhuri Subbiah

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

B Nagaraj Nayak *National Institute of Animal Biotechnology, Hyderabad, Telangana, India.
Preethi Palanisamy *Department of Biotechnology, Anna University, Chennai, Tamilnadu, India.
Sangita VenkataramanDepartment of Biotechnology, Anna University, Chennai, Tamilnadu, India. sangita.venkataraman@gmail.com.
Madhuri SubbiahNational Institute of Animal Biotechnology, Hyderabad, Telangana, India. madhuri@niab.org.in.ORCID http://orcid.org/0000-0002-4128-1625

Funding

BIC, DoBT, AU BT/PR40163/BTIS/137/31/2021NIAB C0007
6 · The paper itself

Abstract

Newcastle disease virus (NDV), an avian paramyxovirus, causes major economic losses in the poultry industry worldwide. NDV strains are classified as avirulent, moderately virulent, or virulent according to the severity of the disease they cause. In order to gain a deeper understanding of the molecular mechanisms of virus-host interactions, we conducted Illumina HiSeq-based RNA-Seq analysis on chicken embryo fibroblast (DF1) cells during the first 24 hours of infection with NDV strain Komarov. Comparative analysis of uninfected DF1 cells versus NDV-infected DF1 cells at 6, 12, and 24 h postinfection identified 462, 459, and 410 differentially expressed genes, respectively. The findings revealed an increase in the expression of genes linked to the MAPK signalling pathway in the initial stages of NDV infection. This overexpression potentially aids viral multiplication while hindering pathogen detection and subsequent immune responses from the host. Our findings provide initial insights into the early responses of DF1 cells to NDV infection.

Indexed as

ChickensFibroblastsGene Expression ProfilingHost-Pathogen InteractionsNewcastle DiseaseNewcastle disease virusAnimalsCell LineChick EmbryoPoultry DiseasesTranscriptomeVirus Replication

Identifiers

PMID39117748

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.