Evidence map›Paper›PMID 39117709›Full record

ArticleScientific reports2024

Two-stage deep neural network for diagnosing fungal keratitis via in vivo confocal microscopy images.

Chun-Peng Li, Weiwei Dai, Yun-Peng Xiao, Mengying Qi, Ling-Xiao Zhang, Lin Gao, Fang-Lue Zhang, Yu-Kun Lai, Chang Liu, Jing Lu and 6 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Chun-Peng LiBeijing Key Laboratory of Mobile Computing and Pervasive Device, Institute of Computing Technology, Chinese Academy of Sciences, Beijing, China.
Weiwei DaiChangsha Aier Eye Hospital, Hunan, China.
Yun-Peng XiaoBeijing Key Laboratory of Mobile Computing and Pervasive Device, Institute of Computing Technology, Chinese Academy of Sciences, Beijing, China.
Mengying QiWuhan Aier Hankou Eye Hospital, Wuhan, China.
Ling-Xiao ZhangBeijing Key Laboratory of Mobile Computing and Pervasive Device, Institute of Computing Technology, Chinese Academy of Sciences, Beijing, China.
Lin GaoBeijing Key Laboratory of Mobile Computing and Pervasive Device, Institute of Computing Technology, Chinese Academy of Sciences, Beijing, China.
Fang-Lue ZhangVictoria University of Wellington, Wellington, New Zealand.
Yu-Kun LaiCardiff University, Wales, UK.
Chang LiuBeijing Aier Intech Eye Hospital, Beijing, China.
Jing LuChengdu Aier East Eye Hospital, Chengdu, China.
Fen ChenWuhan Aier Hankou Eye Hospital, Wuhan, China.
Dan ChenWuhan Aier Hankou Eye Hospital, Wuhan, China.
Shuai ShiBeijing Aier Intech Eye Hospital, Beijing, China.
Shaowei LiBeijing Aier Intech Eye Hospital, Beijing, China.
Qingyan ZengWuhan Aier Hankou Eye Hospital, Wuhan, China. zengqingyan@aierchina.com.
Yiqiang ChenBeijing Key Laboratory of Mobile Computing and Pervasive Device, Institute of Computing Technology, Chinese Academy of Sciences, Beijing, China. yqchen@ict.ac.cn.

Funding

Aier-ICT Joint Laboratory for Digital Ophthalmology SZYK202204Science and Technology Service Network Initiative of the Chinese Academy of Sciences KFJ-STS-QYZD-2021-11-001
6 · The paper itself

Abstract

Timely and effective diagnosis of fungal keratitis (FK) is necessary for suitable treatment and avoiding irreversible vision loss for patients. In vivo confocal microscopy (IVCM) has been widely adopted to guide the FK diagnosis. We present a deep learning framework for diagnosing fungal keratitis using IVCM images to assist ophthalmologists. Inspired by the real diagnostic process, our method employs a two-stage deep architecture for diagnostic predictions based on both image-level and sequence-level information. To the best of our knowledge, we collected the largest dataset with 96,632 IVCM images in total with expert labeling to train and evaluate our method. The specificity and sensitivity of our method in diagnosing FK on the unseen test set achieved 96.65% and 97.57%, comparable or better than experienced ophthalmologists. The network can provide image-level, sequence-level and patient-level diagnostic suggestions to physicians. The results show great promise for assisting ophthalmologists in FK diagnosis.

Indexed as

KeratitisMicroscopy, ConfocalDeep LearningEye Infections, FungalHumansNeural Networks, ComputerSensitivity and SpecificityFungal keratitisImage classificationNeural networkTransformer

Identifiers

PMID39117709
PMCPMC11310506

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.